BLASTX nr result

ID: Coptis21_contig00034919 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034919
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315321.1| predicted protein [Populus trichocarpa] gi|2...   162   2e-38
ref|XP_002882664.1| hypothetical protein ARALYDRAFT_478367 [Arab...   162   3e-38
ref|XP_002862424.1| hypothetical protein ARALYDRAFT_497460 [Arab...   162   3e-38
ref|NP_187648.1| glycerol-3-phosphate dehydrogenase SDP6 [Arabid...   162   3e-38
ref|XP_004140212.1| PREDICTED: glycerol-3-phosphate dehydrogenas...   160   1e-37

>ref|XP_002315321.1| predicted protein [Populus trichocarpa] gi|222864361|gb|EEF01492.1|
           predicted protein [Populus trichocarpa]
          Length = 631

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/108 (70%), Positives = 90/108 (83%)
 Frame = -3

Query: 326 GWEPLYFVQLARSYVPMKKTKGGKIVPEAMDTTTAQHLSSAYGSMAKNVATIAQDEKLGK 147
           GWEP YF  LA+ YV MK+T GGK+VP  MDT  A+HLS AYG++A+ VA IAQ+E LGK
Sbjct: 480 GWEPSYFTVLAQQYVRMKRTYGGKVVPAIMDTAAAKHLSHAYGTLAERVAAIAQNEGLGK 539

Query: 146 RLVHGYPYLEAEVAYCARNEYCENAIDFIARRTRLAFLDVHAATQALP 3
           RL HGYP++EAEVAYCARNEYCE+A+DFIARR+RLAFLD  AA +ALP
Sbjct: 540 RLAHGYPFMEAEVAYCARNEYCESAVDFIARRSRLAFLDTDAAGRALP 587


>ref|XP_002882664.1| hypothetical protein ARALYDRAFT_478367 [Arabidopsis lyrata subsp.
           lyrata] gi|297328504|gb|EFH58923.1| hypothetical protein
           ARALYDRAFT_478367 [Arabidopsis lyrata subsp. lyrata]
          Length = 619

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/108 (72%), Positives = 89/108 (82%)
 Frame = -3

Query: 329 YGWEPLYFVQLARSYVPMKKTKGGKIVPEAMDTTTAQHLSSAYGSMAKNVATIAQDEKLG 150
           YGWEP  F  LA+ YV MKKT GGK+VP AMDT  A+HLS AYGSMA  VATIAQ+E LG
Sbjct: 466 YGWEPSSFTTLAQQYVRMKKTYGGKVVPGAMDTAAAKHLSHAYGSMADRVATIAQEEGLG 525

Query: 149 KRLVHGYPYLEAEVAYCARNEYCENAIDFIARRTRLAFLDVHAATQAL 6
           KRL HG+P+LEAEVAYCAR+EYCE+A+DFIARR R+AFLD  AA +AL
Sbjct: 526 KRLAHGHPFLEAEVAYCARHEYCESAVDFIARRCRIAFLDTDAAARAL 573


>ref|XP_002862424.1| hypothetical protein ARALYDRAFT_497460 [Arabidopsis lyrata subsp.
           lyrata] gi|297307929|gb|EFH38682.1| hypothetical protein
           ARALYDRAFT_497460 [Arabidopsis lyrata subsp. lyrata]
          Length = 617

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/108 (72%), Positives = 89/108 (82%)
 Frame = -3

Query: 329 YGWEPLYFVQLARSYVPMKKTKGGKIVPEAMDTTTAQHLSSAYGSMAKNVATIAQDEKLG 150
           YGWEP  F  LA+ YV MKKT GGK+VP AMDT  A+HLS AYGSMA  VATIAQ+E LG
Sbjct: 464 YGWEPSSFTTLAQQYVRMKKTYGGKVVPGAMDTAAAKHLSHAYGSMADRVATIAQEEGLG 523

Query: 149 KRLVHGYPYLEAEVAYCARNEYCENAIDFIARRTRLAFLDVHAATQAL 6
           KRL HG+P+LEAEVAYCAR+EYCE+A+DFIARR R+AFLD  AA +AL
Sbjct: 524 KRLAHGHPFLEAEVAYCARHEYCESAVDFIARRCRIAFLDTDAAARAL 571


>ref|NP_187648.1| glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis thaliana]
           gi|75266244|sp|Q9SS48.1|SDP6_ARATH RecName:
           Full=Glycerol-3-phosphate dehydrogenase SDP6,
           mitochondrial; AltName: Full=Protein SUGAR-DEPENDENT 6;
           Flags: Precursor gi|6056190|gb|AAF02807.1|AC009400_3
           putative glycerol-3-phosphate dehydrogenase [Arabidopsis
           thaliana] gi|17380778|gb|AAL36219.1| putative
           glycerol-3-phosphate dehydrogenase [Arabidopsis
           thaliana] gi|20465281|gb|AAM20004.1| putative
           glycerol-3-phosphate dehydrogenase [Arabidopsis
           thaliana] gi|332641376|gb|AEE74897.1|
           glycerol-3-phosphate dehydrogenase SDP6 [Arabidopsis
           thaliana]
          Length = 629

 Score =  162 bits (410), Expect = 3e-38
 Identities = 78/108 (72%), Positives = 89/108 (82%)
 Frame = -3

Query: 329 YGWEPLYFVQLARSYVPMKKTKGGKIVPEAMDTTTAQHLSSAYGSMAKNVATIAQDEKLG 150
           YGWEP  F  LA+ YV MKKT GGK+VP AMDT  A+HLS AYGSMA  VATIAQ+E LG
Sbjct: 476 YGWEPSSFTTLAQQYVRMKKTYGGKVVPGAMDTAAAKHLSHAYGSMADRVATIAQEEGLG 535

Query: 149 KRLVHGYPYLEAEVAYCARNEYCENAIDFIARRTRLAFLDVHAATQAL 6
           KRL HG+P+LEAEVAYCAR+EYCE+A+DFIARR R+AFLD  AA +AL
Sbjct: 536 KRLAHGHPFLEAEVAYCARHEYCESAVDFIARRCRIAFLDTDAAARAL 583


>ref|XP_004140212.1| PREDICTED: glycerol-3-phosphate dehydrogenase SDP6,
           mitochondrial-like, partial [Cucumis sativus]
           gi|449490504|ref|XP_004158624.1| PREDICTED:
           glycerol-3-phosphate dehydrogenase SDP6,
           mitochondrial-like, partial [Cucumis sativus]
          Length = 644

 Score =  160 bits (405), Expect = 1e-37
 Identities = 75/108 (69%), Positives = 87/108 (80%)
 Frame = -3

Query: 326 GWEPLYFVQLARSYVPMKKTKGGKIVPEAMDTTTAQHLSSAYGSMAKNVATIAQDEKLGK 147
           GWEP YF  LA+ Y+ MKKT  GK+VP  MDT  A+HLS AYG +A+ VA IAQ+E LGK
Sbjct: 492 GWEPAYFTVLAQQYLRMKKTHNGKVVPGVMDTAAARHLSQAYGVLAERVAAIAQNESLGK 551

Query: 146 RLVHGYPYLEAEVAYCARNEYCENAIDFIARRTRLAFLDVHAATQALP 3
           RL HGYP+LEAEVAYCAR+EYCE+A+DFIARR+RLAFLD  AA  ALP
Sbjct: 552 RLAHGYPFLEAEVAYCARHEYCESAVDFIARRSRLAFLDTDAANHALP 599


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