BLASTX nr result

ID: Coptis21_contig00034902 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034902
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_180148.1| polyketide cyclase/dehydrase domain protein [Ar...   117   1e-24
ref|NP_001235323.1| uncharacterized protein LOC100527896 [Glycin...   114   8e-24
ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus c...   112   4e-23
ref|XP_002878882.1| hypothetical protein ARALYDRAFT_901237 [Arab...   110   9e-23
ref|XP_002272536.1| PREDICTED: uncharacterized protein LOC100242...   108   6e-22

>ref|NP_180148.1| polyketide cyclase/dehydrase domain protein [Arabidopsis thaliana]
           gi|79323057|ref|NP_001031416.1| polyketide
           cyclase/dehydrase domain protein [Arabidopsis thaliana]
           gi|3643606|gb|AAC42253.1| hypothetical protein
           [Arabidopsis thaliana] gi|50253476|gb|AAT71940.1|
           At2g25770 [Arabidopsis thaliana]
           gi|56381959|gb|AAV85698.1| At2g25770 [Arabidopsis
           thaliana] gi|330252656|gb|AEC07750.1| polyketide
           cyclase/dehydrase domain protein [Arabidopsis thaliana]
           gi|330252657|gb|AEC07751.1| polyketide cyclase/dehydrase
           domain protein [Arabidopsis thaliana]
          Length = 167

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/100 (57%), Positives = 75/100 (75%)
 Frame = +3

Query: 3   GSSIPSNASDGSNVNWSTEKLVAIDPVKMVLTYEMIDGNVGFESYVSTIRLLPRDEDDGC 182
           G SI SN  D S   WS EKLVA++PV+ V+ YE+++ N GFESYVST+++LPR E DGC
Sbjct: 64  GFSIGSNGVD-SAARWSKEKLVAVNPVERVMRYEIVESNTGFESYVSTVKILPRGE-DGC 121

Query: 183 VIEWSFAVNPVKGWKLENLIEKYHKGLERMARRIEESIMR 302
           VIEWSF V+PV+G  LENL++KY K LE + + +EE  +R
Sbjct: 122 VIEWSFTVDPVRGLSLENLVKKYEKALEIITKNMEEDALR 161


>ref|NP_001235323.1| uncharacterized protein LOC100527896 [Glycine max]
           gi|255633494|gb|ACU17105.1| unknown [Glycine max]
          Length = 166

 Score =  114 bits (285), Expect = 8e-24
 Identities = 54/99 (54%), Positives = 75/99 (75%)
 Frame = +3

Query: 3   GSSIPSNASDGSNVNWSTEKLVAIDPVKMVLTYEMIDGNVGFESYVSTIRLLPRDEDDGC 182
           GSSIPS+   GS V+WS E+LVA+  V + L YE +D N+GF SY ST+R+L  D+ +GC
Sbjct: 63  GSSIPSSNGSGS-VSWSKERLVAVHDVDLSLKYETVDNNIGFRSYESTMRVLSDDDSNGC 121

Query: 183 VIEWSFAVNPVKGWKLENLIEKYHKGLERMARRIEESIM 299
           ++EWSFAV+PVKG  LE+L+ KYH GL+ MA ++E+ I+
Sbjct: 122 LLEWSFAVDPVKGLVLEDLVRKYHVGLQLMALKMEDEIV 160


>ref|XP_002516521.1| hypothetical protein RCOM_0800710 [Ricinus communis]
           gi|223544341|gb|EEF45862.1| hypothetical protein
           RCOM_0800710 [Ricinus communis]
          Length = 343

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/101 (50%), Positives = 77/101 (76%), Gaps = 4/101 (3%)
 Frame = +3

Query: 3   GSSIPSNASDGSNVN----WSTEKLVAIDPVKMVLTYEMIDGNVGFESYVSTIRLLPRDE 170
           G SIP   +D S++N    WS E+LVA+D V+  LTYE++D N+GF+SYVST++++P   
Sbjct: 67  GFSIPPEVTDKSHLNHNSSWSKERLVAVDHVERCLTYEIVDSNIGFKSYVSTVKIVPAGV 126

Query: 171 DDGCVIEWSFAVNPVKGWKLENLIEKYHKGLERMARRIEES 293
            +GCVIEWSF V+PVKG+ L++LI+KY + L+ + +R+E+S
Sbjct: 127 GNGCVIEWSFQVDPVKGYVLDDLIKKYERALQVIGKRMEDS 167



 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 42/102 (41%), Positives = 66/102 (64%), Gaps = 5/102 (4%)
 Frame = +3

Query: 6   SSIPSNASDGSN---VNWSTEKLVAIDPVKMVLTYEMIDGNVGFESYVSTIRLLP--RDE 170
           +S+P  +SDGS     +W  EKLV I+P +  L+YE++D ++GFESY +T RLL    D 
Sbjct: 237 ASVPQPSSDGSGETTFSWVKEKLVMINPDERCLSYEVVDSSMGFESYAATFRLLQVNGDA 296

Query: 171 DDGCVIEWSFAVNPVKGWKLENLIEKYHKGLERMARRIEESI 296
             GC IEWSF  +PV+ W  ++ +   +  L+ MA++IE+++
Sbjct: 297 QHGCKIEWSFVSDPVEAWSFQDFVTYANSCLQFMAKKIEDAV 338


>ref|XP_002878882.1| hypothetical protein ARALYDRAFT_901237 [Arabidopsis lyrata subsp.
           lyrata] gi|297324721|gb|EFH55141.1| hypothetical protein
           ARALYDRAFT_901237 [Arabidopsis lyrata subsp. lyrata]
          Length = 170

 Score =  110 bits (276), Expect = 9e-23
 Identities = 53/101 (52%), Positives = 74/101 (73%), Gaps = 3/101 (2%)
 Frame = +3

Query: 6   SSIPSNASDGSNVNWSTEKLVAIDPVKMVLTYEMIDGNVGFESYVSTIRLLPRDED---D 176
           S+I SN  + S   WS EKLVA+DPV+ V+ YE+++ N+GFESYVST+++ PR ED   D
Sbjct: 65  SAIRSNGVE-SAAGWSKEKLVAVDPVERVMRYEIVESNIGFESYVSTVKISPRGEDGDVD 123

Query: 177 GCVIEWSFAVNPVKGWKLENLIEKYHKGLERMARRIEESIM 299
           GCVIEWSF V+PV+G  L++L+ KY K LE + + +EE  +
Sbjct: 124 GCVIEWSFTVDPVRGLSLDDLVMKYEKALEVITKNMEEEAL 164


>ref|XP_002272536.1| PREDICTED: uncharacterized protein LOC100242274 [Vitis vinifera]
          Length = 168

 Score =  108 bits (269), Expect = 6e-22
 Identities = 50/100 (50%), Positives = 74/100 (74%), Gaps = 2/100 (2%)
 Frame = +3

Query: 3   GSSIPSNASDGSNVNWSTEKLVAIDPVKMVLTYEMIDGNVGFESYVSTIRLLP--RDEDD 176
           G SI S   + S V+WS EKL A+DP++  LTYE++D N+GF+SYVST+++ P   D + 
Sbjct: 65  GFSIKSEEGENS-VSWSKEKLTAVDPIERSLTYEIVDCNIGFKSYVSTVKITPCGSDSES 123

Query: 177 GCVIEWSFAVNPVKGWKLENLIEKYHKGLERMARRIEESI 296
           GC I+W   V+PVKGW +E+L++K+  GL R+ARR+EE++
Sbjct: 124 GCEIDWWINVDPVKGWVMEDLVKKFEVGLARVARRMEEAL 163


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