BLASTX nr result

ID: Coptis21_contig00034886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034886
         (235 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|1...   133   2e-29
ref|XP_002268255.2| PREDICTED: cystinosin homolog [Vitis vinifer...   132   4e-29
ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativ...   131   7e-29
gb|AFK47052.1| unknown [Lotus japonicus]                              130   1e-28
ref|XP_003547682.1| PREDICTED: cystinosin homolog [Glycine max]       130   1e-28

>ref|XP_002323998.1| predicted protein [Populus trichocarpa] gi|118485298|gb|ABK94508.1|
           unknown [Populus trichocarpa]
           gi|222867000|gb|EEF04131.1| predicted protein [Populus
           trichocarpa]
          Length = 274

 Score =  133 bits (334), Expect = 2e-29
 Identities = 62/78 (79%), Positives = 71/78 (91%)
 Frame = +1

Query: 1   WIITVFSTIQVIMTVIKYIPQAVMNFRRKSTQGWSIGNILLDLLGGMTNYGQMAMQSIDQ 180
           W+I++F++IQV MTVIKYIPQ +MNF RKST G+SIGNILLD LGG+TNY QMA+QSIDQ
Sbjct: 150 WLISIFNSIQVFMTVIKYIPQVIMNFMRKSTDGFSIGNILLDCLGGVTNYAQMAVQSIDQ 209

Query: 181 GSWVNFYGNIGKTLLSLV 234
            SWVNFYGNIGKTLLSLV
Sbjct: 210 NSWVNFYGNIGKTLLSLV 227


>ref|XP_002268255.2| PREDICTED: cystinosin homolog [Vitis vinifera]
           gi|296081320|emb|CBI17702.3| unnamed protein product
           [Vitis vinifera]
          Length = 255

 Score =  132 bits (331), Expect = 4e-29
 Identities = 62/78 (79%), Positives = 70/78 (89%)
 Frame = +1

Query: 1   WIITVFSTIQVIMTVIKYIPQAVMNFRRKSTQGWSIGNILLDLLGGMTNYGQMAMQSIDQ 180
           W+I+VF+TIQV+MTVIKY+PQA MNFRRKST G+SIGNILLDL GG+ NY QM +QSIDQ
Sbjct: 150 WLISVFNTIQVVMTVIKYVPQAFMNFRRKSTDGFSIGNILLDLCGGVANYAQMTVQSIDQ 209

Query: 181 GSWVNFYGNIGKTLLSLV 234
            SWVNFYGNIGK LLSLV
Sbjct: 210 DSWVNFYGNIGKLLLSLV 227


>ref|XP_004142770.1| PREDICTED: cystinosin homolog [Cucumis sativus]
           gi|449483821|ref|XP_004156702.1| PREDICTED: cystinosin
           homolog [Cucumis sativus]
          Length = 274

 Score =  131 bits (329), Expect = 7e-29
 Identities = 60/78 (76%), Positives = 70/78 (89%)
 Frame = +1

Query: 1   WIITVFSTIQVIMTVIKYIPQAVMNFRRKSTQGWSIGNILLDLLGGMTNYGQMAMQSIDQ 180
           W+I++F++IQV MT IKYIPQA+MNF RKST G+SIGNILLD LGG+ NY QMA+QSIDQ
Sbjct: 150 WLISIFNSIQVFMTAIKYIPQAIMNFLRKSTDGFSIGNILLDFLGGLANYAQMAVQSIDQ 209

Query: 181 GSWVNFYGNIGKTLLSLV 234
            SWVNFYGNIGKTLLSL+
Sbjct: 210 NSWVNFYGNIGKTLLSLI 227


>gb|AFK47052.1| unknown [Lotus japonicus]
          Length = 271

 Score =  130 bits (327), Expect = 1e-28
 Identities = 60/78 (76%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   WIITVFSTIQVIMTVIKYIPQAVMNFRRKSTQGWSIGNILLDLLGGMTNYGQMAMQSIDQ 180
           W++++F+ IQ+ MTVIKYIPQAVMNF RKST GWSIGNILLD  GG+ NY QMAMQSIDQ
Sbjct: 151 WLLSIFTAIQISMTVIKYIPQAVMNFMRKSTDGWSIGNILLDFSGGLGNYLQMAMQSIDQ 210

Query: 181 GSWVNFYGNIGKTLLSLV 234
           GSW+NFYGNIGK L+SLV
Sbjct: 211 GSWMNFYGNIGKLLISLV 228


>ref|XP_003547682.1| PREDICTED: cystinosin homolog [Glycine max]
          Length = 193

 Score =  130 bits (326), Expect = 1e-28
 Identities = 61/78 (78%), Positives = 69/78 (88%)
 Frame = +1

Query: 1   WIITVFSTIQVIMTVIKYIPQAVMNFRRKSTQGWSIGNILLDLLGGMTNYGQMAMQSIDQ 180
           W+++VF+TIQV+MT IKYIPQAVMNF RKST G+SIGNILLD  GG+ NYGQM +QSIDQ
Sbjct: 66  WLLSVFNTIQVVMTTIKYIPQAVMNFLRKSTDGFSIGNILLDFSGGIANYGQMVVQSIDQ 125

Query: 181 GSWVNFYGNIGKTLLSLV 234
            SWVNFYGNIGK LLSLV
Sbjct: 126 DSWVNFYGNIGKVLLSLV 143


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