BLASTX nr result
ID: Coptis21_contig00034868
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034868 (484 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ... 59 3e-07 >ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis] gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase, putative [Ricinus communis] Length = 389 Score = 59.3 bits (142), Expect = 3e-07 Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 16/176 (9%) Frame = -3 Query: 482 FIKMHLSKAIEKQDYCLLAPKYRCNGTG--KKLQISCLERDSLENMSFLEYPVL-YQLPF 312 FI +HL+ +IE CN + K ++ L D L+N+ L++P++ Y Sbjct: 40 FIYLHLNHSIESP----------CNLSIILKSSELYSLSFDLLDNIQPLDHPLMCYNHGV 89 Query: 311 -IVGCYNGLVCICDC-SRVCLLNPSTREYKFV-----KLGKGFRCNNC---VLGFGYVAS 162 I+G NGL+CIC+ + L NPS R ++ V +L + F +C V GFGY S Sbjct: 90 KILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLS 149 Query: 161 EDDYVLVSL---XXXXXXXXXSKVDICSLNDASFTTISDLPFTVSRDRVMGSFING 3 DDY LV + S+V + SL S+ I+D+P+ V G + NG Sbjct: 150 NDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANG 205