BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034868
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...    59   3e-07

>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 56/176 (31%), Positives = 85/176 (48%), Gaps = 16/176 (9%)
 Frame = -3

Query: 482 FIKMHLSKAIEKQDYCLLAPKYRCNGTG--KKLQISCLERDSLENMSFLEYPVL-YQLPF 312
           FI +HL+ +IE            CN +   K  ++  L  D L+N+  L++P++ Y    
Sbjct: 40  FIYLHLNHSIESP----------CNLSIILKSSELYSLSFDLLDNIQPLDHPLMCYNHGV 89

Query: 311 -IVGCYNGLVCICDC-SRVCLLNPSTREYKFV-----KLGKGFRCNNC---VLGFGYVAS 162
            I+G  NGL+CIC+    + L NPS R ++ V     +L + F   +C   V GFGY  S
Sbjct: 90  KILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLS 149

Query: 161 EDDYVLVSL---XXXXXXXXXSKVDICSLNDASFTTISDLPFTVSRDRVMGSFING 3
            DDY LV +            S+V + SL   S+  I+D+P+ V      G + NG
Sbjct: 150 NDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANG 205