BLASTX nr result

ID: Coptis21_contig00034863 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034863
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531196.1| zinc finger protein, putative [Ricinus commu...   176   2e-42
emb|CAN70740.1| hypothetical protein VITISV_013920 [Vitis vinifera]   175   4e-42
ref|XP_002321156.1| predicted protein [Populus trichocarpa] gi|2...   174   7e-42
emb|CBI28884.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002528958.1| zinc finger protein, putative [Ricinus commu...   170   1e-40

>ref|XP_002531196.1| zinc finger protein, putative [Ricinus communis]
           gi|223529198|gb|EEF31173.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 577

 Score =  176 bits (446), Expect = 2e-42
 Identities = 81/99 (81%), Positives = 88/99 (88%)
 Frame = -3

Query: 311 FRPYGKDFFGGVPTGRFSNGRLPTDFISESFGCKPTIPAYLDPQYSIKDFATGVCFASAG 132
           F PYG+DF GG PTGRFSNGR+PTDFISE+FG KPT+PAYLDP Y I+DFA GVCFASAG
Sbjct: 52  FAPYGRDFNGGKPTGRFSNGRIPTDFISEAFGLKPTVPAYLDPTYDIQDFAVGVCFASAG 111

Query: 131 TGYDNATSDVLSVIPLWKELEYYKDYQGKLSNYLGDAQA 15
           TGYDNATSDVLSVIPLWKELEYYK+YQ KLS YLG  +A
Sbjct: 112 TGYDNATSDVLSVIPLWKELEYYKEYQKKLSGYLGHEKA 150


>emb|CAN70740.1| hypothetical protein VITISV_013920 [Vitis vinifera]
          Length = 349

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/103 (78%), Positives = 88/103 (85%)
 Frame = -3

Query: 311 FRPYGKDFFGGVPTGRFSNGRLPTDFISESFGCKPTIPAYLDPQYSIKDFATGVCFASAG 132
           F PYG+DF GG PTGRFSNGR+P DFISE+FG KPT+PAYLDP Y+I DFATGVCFASAG
Sbjct: 52  FEPYGRDFTGGRPTGRFSNGRIPPDFISEAFGLKPTVPAYLDPNYNISDFATGVCFASAG 111

Query: 131 TGYDNATSDVLSVIPLWKELEYYKDYQGKLSNYLGDAQAKVIL 3
           TGYDN TSDVLSVIPLWKELEYYK+YQ KL  YLG  +A  IL
Sbjct: 112 TGYDNQTSDVLSVIPLWKELEYYKEYQXKLRAYLGQEKANEIL 154


>ref|XP_002321156.1| predicted protein [Populus trichocarpa] gi|222861929|gb|EEE99471.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  174 bits (441), Expect = 7e-42
 Identities = 80/102 (78%), Positives = 89/102 (87%)
 Frame = -3

Query: 311 FRPYGKDFFGGVPTGRFSNGRLPTDFISESFGCKPTIPAYLDPQYSIKDFATGVCFASAG 132
           F+PYG+DF GG+PTGRF NGR+P DFISE+FG KP IPAYLDP YSI DFATGVCFASAG
Sbjct: 55  FKPYGRDFEGGLPTGRFCNGRIPPDFISEAFGLKPAIPAYLDPLYSISDFATGVCFASAG 114

Query: 131 TGYDNATSDVLSVIPLWKELEYYKDYQGKLSNYLGDAQAKVI 6
           TGYDNATS+VL+VIPLWKELEYYKDYQ KL  Y+GD +A  I
Sbjct: 115 TGYDNATSNVLNVIPLWKELEYYKDYQNKLRAYVGDRKANEI 156


>emb|CBI28884.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  173 bits (439), Expect = 1e-41
 Identities = 81/103 (78%), Positives = 88/103 (85%)
 Frame = -3

Query: 311 FRPYGKDFFGGVPTGRFSNGRLPTDFISESFGCKPTIPAYLDPQYSIKDFATGVCFASAG 132
           F PYG+DF GG PTGRFSNGR+P DFISE+FG KPT+PAYLDP Y+I DFATGVCFASAG
Sbjct: 52  FVPYGRDFTGGRPTGRFSNGRIPPDFISEAFGLKPTVPAYLDPNYNISDFATGVCFASAG 111

Query: 131 TGYDNATSDVLSVIPLWKELEYYKDYQGKLSNYLGDAQAKVIL 3
           TGYDN TSDVLSVIPLWKELEYYK+YQ KL  YLG  +A  IL
Sbjct: 112 TGYDNQTSDVLSVIPLWKELEYYKEYQKKLRAYLGQEKANEIL 154



 Score =  169 bits (427), Expect = 3e-40
 Identities = 80/103 (77%), Positives = 89/103 (86%)
 Frame = -3

Query: 311 FRPYGKDFFGGVPTGRFSNGRLPTDFISESFGCKPTIPAYLDPQYSIKDFATGVCFASAG 132
           F PYG++F GG PTGRFSNGR+ TDFISE+FG KPT+PAYLDP YSIKDFATGV FASAG
Sbjct: 361 FEPYGRNFPGGRPTGRFSNGRISTDFISEAFGLKPTVPAYLDPTYSIKDFATGVSFASAG 420

Query: 131 TGYDNATSDVLSVIPLWKELEYYKDYQGKLSNYLGDAQAKVIL 3
           +GYDNATSDVLSVIPLWKELEYYKDYQ +L  YLG  +A  +L
Sbjct: 421 SGYDNATSDVLSVIPLWKELEYYKDYQTELRAYLGVKKANEVL 463


>ref|XP_002528958.1| zinc finger protein, putative [Ricinus communis]
           gi|223531604|gb|EEF33432.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 352

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/103 (75%), Positives = 89/103 (86%)
 Frame = -3

Query: 311 FRPYGKDFFGGVPTGRFSNGRLPTDFISESFGCKPTIPAYLDPQYSIKDFATGVCFASAG 132
           FRPYG+DF GG PTGRF NGR+P DFIS++FG KP+IPAYLDP +SI DFATGVCFASAG
Sbjct: 55  FRPYGRDFEGGRPTGRFCNGRIPPDFISQAFGLKPSIPAYLDPMFSISDFATGVCFASAG 114

Query: 131 TGYDNATSDVLSVIPLWKELEYYKDYQGKLSNYLGDAQAKVIL 3
           TGYDNATS VL+VIPLWKELEYYKDYQ KL  Y+G+ +A  I+
Sbjct: 115 TGYDNATSKVLNVIPLWKELEYYKDYQNKLRAYIGNDRASEII 157


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