BLASTX nr result

ID: Coptis21_contig00034856 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034856
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chl...    94   1e-17
emb|CBI18108.3| unnamed protein product [Vitis vinifera]               94   1e-17
ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ri...    94   2e-17
ref|XP_002323027.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
ref|XP_003623384.1| MATE efflux family protein expressed [Medica...    89   4e-16

>ref|XP_002264433.2| PREDICTED: MATE efflux family protein 2, chloroplastic [Vitis
           vinifera]
          Length = 561

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = +3

Query: 165 LDGLYYGVFDFAYAAYSMVLVELITLMFLYFAAPVYGLAGVWMGLFHFMSLRVVAGLWR 341
           +DGLYYGV DF YAAYSMVLV LI+ +FL  AAPV GLAGVW GLF FM+LRVVAG+WR
Sbjct: 481 IDGLYYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVWTGLFLFMTLRVVAGIWR 539


>emb|CBI18108.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 45/59 (76%), Positives = 50/59 (84%)
 Frame = +3

Query: 165 LDGLYYGVFDFAYAAYSMVLVELITLMFLYFAAPVYGLAGVWMGLFHFMSLRVVAGLWR 341
           +DGLYYGV DF YAAYSMVLV LI+ +FL  AAPV GLAGVW GLF FM+LRVVAG+WR
Sbjct: 478 IDGLYYGVSDFGYAAYSMVLVALISSVFLLLAAPVCGLAGVWTGLFLFMTLRVVAGIWR 536


>ref|XP_002526679.1| DNA-damage-inducible protein f, putative [Ricinus communis]
           gi|223533979|gb|EEF35701.1| DNA-damage-inducible protein
           f, putative [Ricinus communis]
          Length = 560

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 45/59 (76%), Positives = 49/59 (83%)
 Frame = +3

Query: 165 LDGLYYGVFDFAYAAYSMVLVELITLMFLYFAAPVYGLAGVWMGLFHFMSLRVVAGLWR 341
           LDGLYYGV DF YAAYSMVLV LI+  F+  AAPVYGL GVW GLF FM+LRVVAG+WR
Sbjct: 478 LDGLYYGVSDFGYAAYSMVLVGLISSAFILAAAPVYGLPGVWTGLFLFMTLRVVAGIWR 536


>ref|XP_002323027.1| predicted protein [Populus trichocarpa] gi|222867657|gb|EEF04788.1|
           predicted protein [Populus trichocarpa]
          Length = 567

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 43/59 (72%), Positives = 50/59 (84%)
 Frame = +3

Query: 165 LDGLYYGVFDFAYAAYSMVLVELITLMFLYFAAPVYGLAGVWMGLFHFMSLRVVAGLWR 341
           LDGLYYGV DF +AAYSMVLV LI+ +F+  AAPV+GL GVW GLF FM+LRVVAG+WR
Sbjct: 489 LDGLYYGVSDFGFAAYSMVLVSLISSVFVLVAAPVFGLTGVWAGLFLFMTLRVVAGVWR 547


>ref|XP_003623384.1| MATE efflux family protein expressed [Medicago truncatula]
           gi|355498399|gb|AES79602.1| MATE efflux family protein
           expressed [Medicago truncatula]
          Length = 566

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 42/59 (71%), Positives = 49/59 (83%)
 Frame = +3

Query: 165 LDGLYYGVFDFAYAAYSMVLVELITLMFLYFAAPVYGLAGVWMGLFHFMSLRVVAGLWR 341
           +DGLYYGV DF YAAYSMVLV LI+ +F+  AAPV GL GVW GLF FM+LRV+AG+WR
Sbjct: 489 IDGLYYGVSDFEYAAYSMVLVGLISSVFMLVAAPVVGLPGVWAGLFLFMALRVLAGVWR 547


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