BLASTX nr result

ID: Coptis21_contig00034851 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034851
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus...   177   1e-42
ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [S...   161   6e-38
gb|AFW84961.1| putative MATE efflux family protein [Zea mays]         155   2e-36
ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea ma...   155   2e-36
gb|EAY91081.1| hypothetical protein OsI_12693 [Oryza sativa Indi...   155   3e-36

>ref|XP_002519100.1| multidrug resistance pump, putative [Ricinus communis]
           gi|223541763|gb|EEF43311.1| multidrug resistance pump,
           putative [Ricinus communis]
          Length = 496

 Score =  177 bits (448), Expect = 1e-42
 Identities = 82/117 (70%), Positives = 99/117 (84%)
 Frame = -2

Query: 351 GIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKDISDLAGKYSVLILPQLYAYAINF 172
           G+YMQ+SWIIT + AL L P Y+FASPLL+   Q KDIS+LAGKYS+ +LPQL+A+AINF
Sbjct: 115 GVYMQKSWIITGVAALFLAPFYIFASPLLQLLHQDKDISELAGKYSIWVLPQLFAFAINF 174

Query: 171 PIQKFFQSQSRVWVMTWISAFVLPFHVLLNWILVTKLGYGLVGAAIAGNVSWWLIIL 1
           PIQKF Q+QSRVWVMT IS   L FHVLLNW+LVTKL +GL+GAAIAGN+SW +I+L
Sbjct: 175 PIQKFLQAQSRVWVMTIISVIALAFHVLLNWLLVTKLDHGLLGAAIAGNISWLVIVL 231


>ref|XP_002458553.1| hypothetical protein SORBIDRAFT_03g035610 [Sorghum bicolor]
           gi|241930528|gb|EES03673.1| hypothetical protein
           SORBIDRAFT_03g035610 [Sorghum bicolor]
          Length = 487

 Score =  161 bits (407), Expect = 6e-38
 Identities = 72/115 (62%), Positives = 94/115 (81%)
 Frame = -2

Query: 351 GIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKDISDLAGKYSVLILPQLYAYAINF 172
           G+YMQRSWII   T+L+L P YVF SP+L+  RQS DIS ++G+Y+   +PQL+AYA+NF
Sbjct: 100 GVYMQRSWIICVATSLVLLPLYVFTSPILRLLRQSADISAVSGRYARWCVPQLFAYAVNF 159

Query: 171 PIQKFFQSQSRVWVMTWISAFVLPFHVLLNWILVTKLGYGLVGAAIAGNVSWWLI 7
           P+QKF+Q+QSRVWVMT IS  VL  H LLNW++V++LG GLVGAA+ G+VSWWL+
Sbjct: 160 PMQKFYQAQSRVWVMTAISGAVLAVHALLNWLVVSRLGRGLVGAAVVGDVSWWLV 214


>gb|AFW84961.1| putative MATE efflux family protein [Zea mays]
          Length = 554

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/115 (61%), Positives = 89/115 (77%)
 Frame = -2

Query: 351 GIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKDISDLAGKYSVLILPQLYAYAINF 172
           G+YMQRSWII   T+L L P YVF SPLL+  RQS DIS +AG+Y+   +PQL+AYA+NF
Sbjct: 162 GVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSADISAVAGRYARWCVPQLFAYAVNF 221

Query: 171 PIQKFFQSQSRVWVMTWISAFVLPFHVLLNWILVTKLGYGLVGAAIAGNVSWWLI 7
           PIQKF+Q+QSRVW MT IS   L  H LL+W++V +LG GL GAA+ G+VSWWL+
Sbjct: 222 PIQKFYQAQSRVWAMTAISGAALAVHALLSWLVVARLGRGLAGAAVVGDVSWWLV 276


>ref|NP_001146663.1| uncharacterized protein LOC100280263 [Zea mays]
           gi|219888227|gb|ACL54488.1| unknown [Zea mays]
          Length = 490

 Score =  155 bits (393), Expect = 2e-36
 Identities = 71/115 (61%), Positives = 89/115 (77%)
 Frame = -2

Query: 351 GIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKDISDLAGKYSVLILPQLYAYAINF 172
           G+YMQRSWII   T+L L P YVF SPLL+  RQS DIS +AG+Y+   +PQL+AYA+NF
Sbjct: 98  GVYMQRSWIICLATSLALLPLYVFTSPLLRMLRQSADISAVAGRYARWCVPQLFAYAVNF 157

Query: 171 PIQKFFQSQSRVWVMTWISAFVLPFHVLLNWILVTKLGYGLVGAAIAGNVSWWLI 7
           PIQKF+Q+QSRVW MT IS   L  H LL+W++V +LG GL GAA+ G+VSWWL+
Sbjct: 158 PIQKFYQAQSRVWAMTAISGAALAVHALLSWLVVARLGRGLAGAAVVGDVSWWLV 212


>gb|EAY91081.1| hypothetical protein OsI_12693 [Oryza sativa Indica Group]
          Length = 409

 Score =  155 bits (392), Expect = 3e-36
 Identities = 72/117 (61%), Positives = 93/117 (79%)
 Frame = -2

Query: 351 GIYMQRSWIITCITALILTPTYVFASPLLKFFRQSKDISDLAGKYSVLILPQLYAYAINF 172
           G+Y+QRSWII   TA+ILTPTYVF + +L+  RQ  DI+ +AG Y+  ++PQL+AYA NF
Sbjct: 22  GVYIQRSWIICGATAVILTPTYVFTAGILRGLRQPTDIAAVAGTYTRWVIPQLFAYAANF 81

Query: 171 PIQKFFQSQSRVWVMTWISAFVLPFHVLLNWILVTKLGYGLVGAAIAGNVSWWLIIL 1
           P+QKFFQSQS+VW MT IS   L  HV+LN+I +T+LG+GLV AA+ GNV+WWLIIL
Sbjct: 82  PLQKFFQSQSKVWAMTAISGIALALHVVLNYIFLTRLGHGLVAAALIGNVTWWLIIL 138


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