BLASTX nr result

ID: Coptis21_contig00034843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034843
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22470.3| unnamed protein product [Vitis vinifera]               72   4e-11
emb|CAN69353.1| hypothetical protein VITISV_014038 [Vitis vinifera]    72   6e-11
ref|XP_002510111.1| conserved hypothetical protein [Ricinus comm...    69   3e-10
ref|XP_002320697.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
emb|CBI19417.3| unnamed protein product [Vitis vinifera]               69   4e-10

>emb|CBI22470.3| unnamed protein product [Vitis vinifera]
          Length = 130

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/55 (58%), Positives = 40/55 (72%)
 Frame = -3

Query: 237 RKLKEKGYYPSIVNNRKNGQDVNLEDYQPVDPVPSSRTSITSGPIEHGAPLIPYI 73
           RKL+   Y P+    + N  ++NLEDY P+DP PSSR +ITSGPIEHG P+IPYI
Sbjct: 57  RKLELGSYKPTTEQRKSNPGNLNLEDYHPIDPSPSSRAAITSGPIEHGTPIIPYI 111


>emb|CAN69353.1| hypothetical protein VITISV_014038 [Vitis vinifera]
          Length = 238

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -3

Query: 237 RKLKEKGYYPSIVNNRKNGQDVNLEDYQPVDPVPSSRTSITSGPIEHGAPLIPYI 73
           RKL+   Y P     + N  ++NLEDY P+DP PSSR +ITSGPIEHG P+IPYI
Sbjct: 165 RKLELGSYKPXTEQRKSNPGNLNLEDYHPIDPSPSSRAAITSGPIEHGTPIIPYI 219


>ref|XP_002510111.1| conserved hypothetical protein [Ricinus communis]
           gi|223550812|gb|EEF52298.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 120

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/56 (57%), Positives = 41/56 (73%)
 Frame = -3

Query: 240 NRKLKEKGYYPSIVNNRKNGQDVNLEDYQPVDPVPSSRTSITSGPIEHGAPLIPYI 73
           +RKLKE  YYPS  + + +   +NL+DY P+DPVPSS+ SI  GPIEHG PL P+I
Sbjct: 51  SRKLKENNYYPS-TDKKGDTSLLNLDDYHPIDPVPSSKASIKPGPIEHGTPLNPFI 105


>ref|XP_002320697.1| predicted protein [Populus trichocarpa] gi|222861470|gb|EEE99012.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 34/56 (60%), Positives = 41/56 (73%)
 Frame = -3

Query: 240 NRKLKEKGYYPSIVNNRKNGQDVNLEDYQPVDPVPSSRTSITSGPIEHGAPLIPYI 73
           +RKLKE GY  +  + + N  +VNLEDY P+DPVPSS+ SI  GPIEHG PL PYI
Sbjct: 33  SRKLKENGYDLND-DVKTNAHNVNLEDYHPIDPVPSSKASIKPGPIEHGTPLNPYI 87


>emb|CBI19417.3| unnamed protein product [Vitis vinifera]
          Length = 117

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 33/57 (57%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
 Frame = -3

Query: 240 NRKLKEKGYYPSIVNNRKN-GQDVNLEDYQPVDPVPSSRTSITSGPIEHGAPLIPYI 73
           +RKLK  GY  ++  ++K    +VNLEDY P+DPVPSS+ SI  GPI+HG PLIPYI
Sbjct: 46  SRKLKVNGYEHNLGTDKKIIAGNVNLEDYHPIDPVPSSKASIKPGPIQHGTPLIPYI 102


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