BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034826
         (567 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   135   4e-30
ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat...   135   4e-30
ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pen...   135   6e-30
emb|CBI27406.3| unnamed protein product [Vitis vinifera]              135   6e-30
ref|XP_002514579.1| pentatricopeptide repeat-containing protein,...   131   7e-29

>ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  135 bits (341), Expect = 4e-30
 Identities = 66/163 (40%), Positives = 104/163 (63%)
 Frame = +3

Query: 78  KTLISSLNPSQVDSIIHHFKNTKQEXXXXXXXXXXXXXXXXXXXXXXXXXHFYISHILAG 257
           +T++S+L+ + VD ++   +  K +                          F +SHILAG
Sbjct: 74  RTVVSTLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFS----QFVVSHILAG 129

Query: 258 KYKLKDLRVILHSLLDNEGPGSAPLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDA 437
           K + K+L  ++ +L+ ++G GSA ++C+LL  +F++ + +G+VW+MLA  Y + EM+HDA
Sbjct: 130 KGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDA 189

Query: 438 LFVIAKMKDFKYQVSNSTYNSLLYNFRHTEMMWGIYNEMKVNG 566
           LFVIAKMKD  +Q S  TYNSLL+N RHT++MW +YNE+KV+G
Sbjct: 190 LFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSG 232


>ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  135 bits (341), Expect = 4e-30
 Identities = 66/163 (40%), Positives = 104/163 (63%)
 Frame = +3

Query: 78  KTLISSLNPSQVDSIIHHFKNTKQEXXXXXXXXXXXXXXXXXXXXXXXXXHFYISHILAG 257
           +T++S+L+ + VD ++   +  K +                          F +SHILAG
Sbjct: 74  RTVVSTLSETVVDGVLDRLRTLKPDVAVAFFYFLINEYGFRHSIFS----QFVVSHILAG 129

Query: 258 KYKLKDLRVILHSLLDNEGPGSAPLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDA 437
           K + K+L  ++ +L+ ++G GSA ++C+LL  +F++ + +G+VW+MLA  Y + EM+HDA
Sbjct: 130 KGRFKELDSVIKNLIVDQGLGSASIICDLLLEKFRNWDSNGLVWDMLAFAYSRHEMIHDA 189

Query: 438 LFVIAKMKDFKYQVSNSTYNSLLYNFRHTEMMWGIYNEMKVNG 566
           LFVIAKMKD  +Q S  TYNSLL+N RHT++MW +YNE+KV+G
Sbjct: 190 LFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSG 232


>ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  135 bits (339), Expect = 6e-30
 Identities = 62/112 (55%), Positives = 85/112 (75%)
 Frame = +3

Query: 231 FYISHILAGKYKLKDLRVILHSLLDNEGPGSAPLLCELLWREFKDCEYSGMVWNMLAKEY 410
           F +SH++A K + K+LR +L+ +++ EG GSAP LCELL   F+D + + +VW+MLA  Y
Sbjct: 119 FIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAY 178

Query: 411 LKLEMVHDALFVIAKMKDFKYQVSNSTYNSLLYNFRHTEMMWGIYNEMKVNG 566
            + EMVHDALFV+AKMK    QVS +TYNSLLYN RHT++MW +YNE+K +G
Sbjct: 179 SRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASG 230


>emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  135 bits (339), Expect = 6e-30
 Identities = 62/112 (55%), Positives = 85/112 (75%)
 Frame = +3

Query: 231 FYISHILAGKYKLKDLRVILHSLLDNEGPGSAPLLCELLWREFKDCEYSGMVWNMLAKEY 410
           F +SH++A K + K+LR +L+ +++ EG GSAP LCELL   F+D + + +VW+MLA  Y
Sbjct: 119 FIVSHVVARKGQSKELRRVLNQMVEEEGSGSAPSLCELLCNSFRDWDLNNVVWDMLACAY 178

Query: 411 LKLEMVHDALFVIAKMKDFKYQVSNSTYNSLLYNFRHTEMMWGIYNEMKVNG 566
            + EMVHDALFV+AKMK    QVS +TYNSLLYN RHT++MW +YNE+K +G
Sbjct: 179 SRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDVYNEIKASG 230


>ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546183|gb|EEF47685.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 840

 Score =  131 bits (330), Expect = 7e-29
 Identities = 72/163 (44%), Positives = 93/163 (57%)
 Frame = +3

Query: 78  KTLISSLNPSQVDSIIHHFKNTKQEXXXXXXXXXXXXXXXXXXXXXXXXXHFYISHILAG 257
           K  I  LN SQVD II H      +                            +SH+LA 
Sbjct: 83  KEKIFMLNHSQVDQIIEHLNVEDADSAVDFYYLLSNEFGFQHSRFS----RLVVSHVLAR 138

Query: 258 KYKLKDLRVILHSLLDNEGPGSAPLLCELLWREFKDCEYSGMVWNMLAKEYLKLEMVHDA 437
           K +L +LR++L  +L +EG GSAP LCELL   F+  + S +VW+MLA  Y +  MVHDA
Sbjct: 139 KKRLNELRLVLDQMLLHEGSGSAPSLCELLLGSFRSWDSSNVVWDMLACAYSRSAMVHDA 198

Query: 438 LFVIAKMKDFKYQVSNSTYNSLLYNFRHTEMMWGIYNEMKVNG 566
           LFV+ KMKD  + VS  TYNSLLYN RH+ +MW +YNE+KV+G
Sbjct: 199 LFVLVKMKDLNFIVSIQTYNSLLYNLRHSNIMWDVYNEIKVSG 241