BLASTX nr result

ID: Coptis21_contig00034821 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034821
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriand...   100   9e-20
ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...    93   2e-17
emb|CBI21093.3| unnamed protein product [Vitis vinifera]               93   2e-17
dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...    91   7e-17
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16

>gb|ADG26667.1| homogentisate geranylgeranyl transferase [Coriandrum sativum]
          Length = 401

 Score =  100 bits (250), Expect = 9e-20
 Identities = 50/97 (51%), Positives = 65/97 (67%)
 Frame = +1

Query: 40  TPEHETAAILEDDHSISFQSGLMKKLDVIQRFCRPFMIVGTAIGASSISLLPLETISELT 219
           T EHE     +DD     Q  L +K+D   RF RP  I+GT IG +S+SLLPL +I +L+
Sbjct: 80  TLEHEFVIESKDDQLTLLQGDLWRKIDAFYRFSRPHTIIGTIIGITSVSLLPLTSIGDLS 139

Query: 220 PSFLIGVLLALTPVAMMDIYMNGINELFDVEIDKVNK 330
           P+F +G L AL P   M+IY+ G+N+LFDVEIDKVNK
Sbjct: 140 PAFFVGYLKALIPSIFMNIYVVGLNQLFDVEIDKVNK 176


>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = +1

Query: 94  QSGLMKKLDVIQRFCRPFMIVGTAIGASSISLLPLETISELTPSFLIGVLLALTPVAMMD 273
           Q+ + K+L     F RP  I+GT IG +S+SLLPLETIS+L+P+F +G+L A+ P  +M+
Sbjct: 94  QNHVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMN 153

Query: 274 IYMNGINELFDVEIDKVNK 330
           IY+ G+N++FDVEIDKVNK
Sbjct: 154 IYVVGLNQIFDVEIDKVNK 172


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/79 (54%), Positives = 61/79 (77%)
 Frame = +1

Query: 94  QSGLMKKLDVIQRFCRPFMIVGTAIGASSISLLPLETISELTPSFLIGVLLALTPVAMMD 273
           Q+ + K+L     F RP  I+GT IG +S+SLLPLETIS+L+P+F +G+L A+ P  +M+
Sbjct: 70  QNHVSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMN 129

Query: 274 IYMNGINELFDVEIDKVNK 330
           IY+ G+N++FDVEIDKVNK
Sbjct: 130 IYVVGLNQIFDVEIDKVNK 148


>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/87 (49%), Positives = 66/87 (75%)
 Frame = +1

Query: 70  EDDHSISFQSGLMKKLDVIQRFCRPFMIVGTAIGASSISLLPLETISELTPSFLIGVLLA 249
           +D  S S +  +++ L+ + +F RP  ++GT IG +S+SLLP+ETI +L+P++ IG+L A
Sbjct: 98  DDICSSSKRGPILEHLNSLYQFSRPHTVIGTIIGITSVSLLPVETIVDLSPTYFIGLLKA 157

Query: 250 LTPVAMMDIYMNGINELFDVEIDKVNK 330
           L P  +M+IY+ G+N+LFDVEIDKVNK
Sbjct: 158 LVPSVLMNIYVVGLNQLFDVEIDKVNK 184


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/67 (61%), Positives = 56/67 (83%)
 Frame = +1

Query: 130 RFCRPFMIVGTAIGASSISLLPLETISELTPSFLIGVLLALTPVAMMDIYMNGINELFDV 309
           +F RP  ++GT IG +S+SLLP+ETISEL+P+F +G+L AL P  +M+IY+ G+N+LFDV
Sbjct: 6   QFSRPHTVIGTLIGITSVSLLPVETISELSPTFFMGLLKALVPSVLMNIYVVGLNQLFDV 65

Query: 310 EIDKVNK 330
           EIDKVNK
Sbjct: 66  EIDKVNK 72


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