BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034808
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   140   8e-32
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   137   9e-31
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   137   9e-31
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   133   1e-29
dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]    126   2e-27

>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  140 bits (354), Expect = 8e-32
 Identities = 63/68 (92%), Positives = 66/68 (97%)
 Frame = -3

Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211
           SEKLAVAFGLIATP G PIRVKKNLR+CVDCHTFFKFVCKIVSREIIVRDINRFHHF+DG
Sbjct: 791 SEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDG 850

Query: 210 ACSCGDYW 187
           +CSCGDYW
Sbjct: 851 SCSCGDYW 858


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 933

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = -3

Query: 390  SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211
            SEKLAVAFGLIATP G PIRVKKNLRVCVDCHT FK++CKIVSREIIVRDINRFHHF+DG
Sbjct: 866  SEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDG 925

Query: 210  ACSCGDYW 187
            +CSCGDYW
Sbjct: 926  SCSCGDYW 933


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  137 bits (345), Expect = 9e-31
 Identities = 61/68 (89%), Positives = 65/68 (95%)
 Frame = -3

Query: 390  SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211
            SEKLAVAFGLIATP G PIRVKKNLRVCVDCHT FK++CKIVSREIIVRDINRFHHF+DG
Sbjct: 839  SEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDG 898

Query: 210  ACSCGDYW 187
            +CSCGDYW
Sbjct: 899  SCSCGDYW 906


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  133 bits (335), Expect = 1e-29
 Identities = 59/68 (86%), Positives = 63/68 (92%)
 Frame = -3

Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211
           SEKLAVAFGLIATP G PIRVKKNLRVC+DCHT FKF+ K+ SREIIVRDINRFHHFRDG
Sbjct: 796 SEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDG 855

Query: 210 ACSCGDYW 187
           +CSCGDYW
Sbjct: 856 SCSCGDYW 863


>dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  126 bits (317), Expect = 2e-27
 Identities = 56/68 (82%), Positives = 61/68 (89%)
 Frame = -3

Query: 390  SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211
            SE+LAVAF LI+TPAG PIRVKKNLR+C DCH  FKF+ KIVSREII+RDINRFHHF DG
Sbjct: 812  SERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDG 871

Query: 210  ACSCGDYW 187
            ACSCGDYW
Sbjct: 872  ACSCGDYW 879