BLASTX nr result
ID: Coptis21_contig00034808
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034808 (428 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi... 140 8e-32 ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi... 137 9e-31 emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera] 137 9e-31 ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 133 1e-29 dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare] 126 2e-27 >ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Glycine max] Length = 858 Score = 140 bits (354), Expect = 8e-32 Identities = 63/68 (92%), Positives = 66/68 (97%) Frame = -3 Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211 SEKLAVAFGLIATP G PIRVKKNLR+CVDCHTFFKFVCKIVSREIIVRDINRFHHF+DG Sbjct: 791 SEKLAVAFGLIATPPGGPIRVKKNLRICVDCHTFFKFVCKIVSREIIVRDINRFHHFKDG 850 Query: 210 ACSCGDYW 187 +CSCGDYW Sbjct: 851 SCSCGDYW 858 >ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like [Vitis vinifera] Length = 933 Score = 137 bits (345), Expect = 9e-31 Identities = 61/68 (89%), Positives = 65/68 (95%) Frame = -3 Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211 SEKLAVAFGLIATP G PIRVKKNLRVCVDCHT FK++CKIVSREIIVRDINRFHHF+DG Sbjct: 866 SEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDG 925 Query: 210 ACSCGDYW 187 +CSCGDYW Sbjct: 926 SCSCGDYW 933 >emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera] Length = 906 Score = 137 bits (345), Expect = 9e-31 Identities = 61/68 (89%), Positives = 65/68 (95%) Frame = -3 Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211 SEKLAVAFGLIATP G PIRVKKNLRVCVDCHT FK++CKIVSREIIVRDINRFHHF+DG Sbjct: 839 SEKLAVAFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDG 898 Query: 210 ACSCGDYW 187 +CSCGDYW Sbjct: 899 SCSCGDYW 906 >ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At3g57430, chloroplastic-like [Cucumis sativus] Length = 863 Score = 133 bits (335), Expect = 1e-29 Identities = 59/68 (86%), Positives = 63/68 (92%) Frame = -3 Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211 SEKLAVAFGLIATP G PIRVKKNLRVC+DCHT FKF+ K+ SREIIVRDINRFHHFRDG Sbjct: 796 SEKLAVAFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDG 855 Query: 210 ACSCGDYW 187 +CSCGDYW Sbjct: 856 SCSCGDYW 863 >dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 879 Score = 126 bits (317), Expect = 2e-27 Identities = 56/68 (82%), Positives = 61/68 (89%) Frame = -3 Query: 390 SEKLAVAFGLIATPAGTPIRVKKNLRVCVDCHTFFKFVCKIVSREIIVRDINRFHHFRDG 211 SE+LAVAF LI+TPAG PIRVKKNLR+C DCH FKF+ KIVSREII+RDINRFHHF DG Sbjct: 812 SERLAVAFALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDG 871 Query: 210 ACSCGDYW 187 ACSCGDYW Sbjct: 872 ACSCGDYW 879