BLASTX nr result

ID: Coptis21_contig00034791 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034791
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304433.1| predicted protein [Populus trichocarpa] gi|2...    79   5e-13
ref|XP_002509599.1| nucleic acid binding protein, putative [Rici...    68   9e-10
ref|XP_002509600.1| nucleic acid binding protein, putative [Rici...    64   1e-08
ref|XP_003537527.1| PREDICTED: uncharacterized protein LOC100785...    63   2e-08
ref|XP_004159528.1| PREDICTED: uncharacterized LOC101211196 [Cuc...    62   5e-08

>ref|XP_002304433.1| predicted protein [Populus trichocarpa] gi|222841865|gb|EEE79412.1|
           predicted protein [Populus trichocarpa]
          Length = 300

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 41/85 (48%), Positives = 53/85 (62%), Gaps = 11/85 (12%)
 Frame = -1

Query: 308 LGRWTDRDVLKRLEWTYRPELEKREH----DYDESQS-------ESEDGDAERIAFGKGR 162
           +GRW DRDVLKRLEWTY PE+EK  H    ++D  +S       +SEDGD + I  G   
Sbjct: 215 VGRWKDRDVLKRLEWTYDPEVEKNLHGMVYEFDNHESKDECDGNDSEDGDIDNILDGDDV 274

Query: 161 DHVTKEDLRPWWELDSDVDDTPAKS 87
             + KED R WWELDS+ + T ++S
Sbjct: 275 GCLQKEDARGWWELDSNPEVTSSQS 299


>ref|XP_002509599.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223549498|gb|EEF50986.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 294

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/73 (41%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -1

Query: 308 LGRWTDRDVLKRLEWTYRPELEKR-----EHDYDESQSESEDGDAERIAFGKGRDHVTKE 144
           +G+W DRD+LK+LEWTY PE +K+      +DY+    E E+GD +  +   G + + KE
Sbjct: 219 VGKWKDRDILKKLEWTYNPEEQKKFVVNAFNDYNSDNDEIENGDFDGFSDENGANCMQKE 278

Query: 143 DLRPWWELDSDVD 105
            +  WWEL+SD +
Sbjct: 279 AVGAWWELNSDTE 291


>ref|XP_002509600.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223549499|gb|EEF50987.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 375

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/73 (38%), Positives = 46/73 (63%), Gaps = 5/73 (6%)
 Frame = -1

Query: 308 LGRWTDRDVLKRLEWTYRPELEKR-----EHDYDESQSESEDGDAERIAFGKGRDHVTKE 144
           +G+W DRD+LK+LEWTY PE +K+      +DY+    E ++GD +  +   G + + KE
Sbjct: 300 VGKWKDRDILKKLEWTYNPEEQKKFVVNAFNDYNGDTDEIDNGDFDGFSDENGANCMQKE 359

Query: 143 DLRPWWELDSDVD 105
            +  WWEL+S+ +
Sbjct: 360 AVGAWWELNSETE 372


>ref|XP_003537527.1| PREDICTED: uncharacterized protein LOC100785257 [Glycine max]
          Length = 393

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/71 (40%), Positives = 41/71 (57%)
 Frame = -1

Query: 299 WTDRDVLKRLEWTYRPELEKREHDYDESQSESEDGDAERIAFGKGRDHVTKEDLRPWWEL 120
           W DRD+LK+LEWTY P+ +K   + D++ +E+ + D          D   K+D   WWEL
Sbjct: 313 WKDRDILKKLEWTYNPDEDKSNFNLDDTVTEASEDDNIEDTTCDEVDDAYKDDRGSWWEL 372

Query: 119 DSDVDDTPAKS 87
           DSD D T  +S
Sbjct: 373 DSDDDATNRQS 383


>ref|XP_004159528.1| PREDICTED: uncharacterized LOC101211196 [Cucumis sativus]
          Length = 368

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 29/74 (39%), Positives = 41/74 (55%)
 Frame = -1

Query: 308 LGRWTDRDVLKRLEWTYRPELEKREHDYDESQSESEDGDAERIAFGKGRDHVTKEDLRPW 129
           +G+W DRDVLKRLEWTY P LEK+    D+   E +D +   +  G   +++   D   W
Sbjct: 292 VGKWKDRDVLKRLEWTYNPPLEKKVSGLDDDIGEDDDVEGGSVDGGL-CENMQNNDRGAW 350

Query: 128 WELDSDVDDTPAKS 87
           W+L SD +     S
Sbjct: 351 WDLSSDAETDTVSS 364


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