BLASTX nr result

ID: Coptis21_contig00034789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034789
         (328 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16457.3| unnamed protein product [Vitis vinifera]              153   2e-35
ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein lig...   153   2e-35
emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]   153   2e-35
ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus]    119   3e-25

>emb|CBI16457.3| unnamed protein product [Vitis vinifera]
          Length = 1084

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/108 (67%), Positives = 88/108 (81%)
 Frame = -3

Query: 326 KGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKD 147
           +G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG + KD
Sbjct: 644 QGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGVEPKD 703

Query: 146 RRAVLILEKLLVGFRTEERLTNAKHLISLGGLQFLILRFELGNLEEKS 3
             A+  LE+ L G   EE+LTNAKHLISLGGLQFL  RFELGNLEEK+
Sbjct: 704 ETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKT 751


>ref|XP_002283306.1| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1148

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/108 (67%), Positives = 88/108 (81%)
 Frame = -3

Query: 326  KGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKD 147
            +G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG + KD
Sbjct: 708  QGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGVEPKD 767

Query: 146  RRAVLILEKLLVGFRTEERLTNAKHLISLGGLQFLILRFELGNLEEKS 3
              A+  LE+ L G   EE+LTNAKHLISLGGLQFL  RFELGNLEEK+
Sbjct: 768  ETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKT 815


>emb|CAN71223.1| hypothetical protein VITISV_011730 [Vitis vinifera]
          Length = 1148

 Score =  153 bits (386), Expect = 2e-35
 Identities = 73/108 (67%), Positives = 88/108 (81%)
 Frame = -3

Query: 326  KGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKD 147
            +G R CP+TGK LE LG+P+TNF+LKRVID WKSE+C +LLAFASK++G+S EHG + KD
Sbjct: 708  QGNRNCPVTGKALEGLGVPLTNFILKRVIDGWKSENCRHLLAFASKVEGSSGEHGVEPKD 767

Query: 146  RRAVLILEKLLVGFRTEERLTNAKHLISLGGLQFLILRFELGNLEEKS 3
              A+  LE+ L G   EE+LTNAKHLISLGGLQFL  RFELGNLEEK+
Sbjct: 768  ETAIYALEQFLSGSSKEEKLTNAKHLISLGGLQFLTRRFELGNLEEKT 815


>ref|XP_002304021.1| predicted protein [Populus trichocarpa] gi|222841453|gb|EEE79000.1|
            predicted protein [Populus trichocarpa]
          Length = 1159

 Score =  126 bits (317), Expect = 2e-27
 Identities = 62/108 (57%), Positives = 80/108 (74%)
 Frame = -3

Query: 326  KGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKD 147
            +G RTCP+TGK LE   +P+TNF+LKR+ID WK E C +LL+FAS++   S  +  + ++
Sbjct: 723  QGNRTCPLTGKTLECPTIPLTNFILKRMIDSWKLERCNHLLSFASQIFKNSEAYDSRQRN 782

Query: 146  RRAVLILEKLLVGFRTEERLTNAKHLISLGGLQFLILRFELGNLEEKS 3
              A+ ILEKLL     EERLTNAKHLISLG L+FLI RFE G+LEEK+
Sbjct: 783  EDALFILEKLLASSSREERLTNAKHLISLGVLEFLIKRFEFGSLEEKT 830


>gb|ACJ02343.1| U-box domain-containing protein [Helianthus annuus]
          Length = 1050

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/108 (54%), Positives = 78/108 (72%)
 Frame = -3

Query: 326 KGKRTCPITGKNLESLGLPITNFVLKRVIDRWKSEHCGNLLAFASKMQGTSSEHGFKSKD 147
           KG +TCP+TGK LE   +P TN +LKR+ID WKS+H   +L+ AS+  G+  EH +K++ 
Sbjct: 661 KGNKTCPVTGKTLEYQTVPFTNSILKRLIDSWKSKHSREMLSSASRPMGSPREHEYKAE- 719

Query: 146 RRAVLILEKLLVGFRTEERLTNAKHLISLGGLQFLILRFELGNLEEKS 3
             AV ILE+LL  F  EE   NAKHL++LGGLQFLI RF+ GNL+EK+
Sbjct: 720 -AAVFILEQLLTVFGREENTANAKHLLALGGLQFLIQRFQYGNLDEKT 766


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