BLASTX nr result

ID: Coptis21_contig00034785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034785
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301398.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
ref|XP_004160368.1| PREDICTED: solute carrier family 25 member 3...    58   7e-07
ref|XP_004145920.1| PREDICTED: solute carrier family 25 member 3...    58   7e-07
ref|XP_002513593.1| mitochondrial carrier protein, putative [Ric...    57   2e-06
gb|AAL84928.1| At2g46320/F11C10.1 [Arabidopsis thaliana]               57   2e-06

>ref|XP_002301398.1| predicted protein [Populus trichocarpa] gi|222843124|gb|EEE80671.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 48/136 (35%), Positives = 60/136 (44%), Gaps = 27/136 (19%)
 Frame = +2

Query: 35  SRHSLPS-IMSTASTKKVGKVVSETM------EGQNSSSLPTVKDSNLSFAERXXXXXXX 193
           SR SLPS I + A+T    +V  E +      + + S S+P+  D +L F ER       
Sbjct: 5   SRQSLPSWITAAAATTTTTRVDIEGINKEGGPKNEESKSVPSASDFDLGFVERAFAAAGA 64

Query: 194 XXXXXXXXNPLDVAKTRLQAEAAGVPY------------------SHSHHRFRG--HLSS 313
                   NPLDVAKTRLQA+AAGVPY                    S H   G   L +
Sbjct: 65  AVLSAVIVNPLDVAKTRLQAQAAGVPYQGLCGTASFESNTMFPCVKSSSHAVPGSQQLCA 124

Query: 314 LGPKSYSGTLDVFYKI 361
                Y G LDVF K+
Sbjct: 125 SECNRYKGALDVFNKV 140


>ref|XP_004160368.1| PREDICTED: solute carrier family 25 member 39-like [Cucumis
           sativus]
          Length = 421

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 42/122 (34%), Positives = 50/122 (40%), Gaps = 32/122 (26%)
 Frame = +2

Query: 92  VVSETMEGQNSSSLP---TVKDSNLSFAERXXXXXXXXXXXXXXXNPLDVAKTRLQAEAA 262
           VVS+ +    S S P   T  +  L   ER               NPLDVAKTRLQA+AA
Sbjct: 40  VVSDEVRFSASQSQPSNVTATNEKLGLGERAFSAAGAAFLSAVIVNPLDVAKTRLQAQAA 99

Query: 263 GVPYSHSHHRFRGHLSSLGPKS-----------------------------YSGTLDVFY 355
           GVPYSH    +   ++  GP +                             Y GTLDVFY
Sbjct: 100 GVPYSHPLSDWTSRMAFFGPNTMFADLRCSPSCARAGVHGTVAICPPDCFQYKGTLDVFY 159

Query: 356 KI 361
           KI
Sbjct: 160 KI 161


>ref|XP_004145920.1| PREDICTED: solute carrier family 25 member 39-like [Cucumis
           sativus]
          Length = 421

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 42/122 (34%), Positives = 50/122 (40%), Gaps = 32/122 (26%)
 Frame = +2

Query: 92  VVSETMEGQNSSSLP---TVKDSNLSFAERXXXXXXXXXXXXXXXNPLDVAKTRLQAEAA 262
           VVS+ +    S S P   T  +  L   ER               NPLDVAKTRLQA+AA
Sbjct: 40  VVSDEVRFSASQSQPSNDTATNEKLGLGERAFSAAGAAFLSAVIVNPLDVAKTRLQAQAA 99

Query: 263 GVPYSHSHHRFRGHLSSLGPKS-----------------------------YSGTLDVFY 355
           GVPYSH    +   ++  GP +                             Y GTLDVFY
Sbjct: 100 GVPYSHPLSDWTSRMAFFGPNTMFADLRCSPSCARAGVHGTVAICPPDCFQYKGTLDVFY 159

Query: 356 KI 361
           KI
Sbjct: 160 KI 161


>ref|XP_002513593.1| mitochondrial carrier protein, putative [Ricinus communis]
           gi|223547501|gb|EEF48996.1| mitochondrial carrier
           protein, putative [Ricinus communis]
          Length = 416

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 40/111 (36%), Positives = 46/111 (41%), Gaps = 29/111 (26%)
 Frame = +2

Query: 116 QNSSSLPTVKDSNLSFAERXXXXXXXXXXXXXXXNPLDVAKTRLQAEAAGVPYSHSHHRF 295
           Q+++S P   D  L F ER               NPLDVAKTRLQA+AAGVPYSH     
Sbjct: 51  QSNNSKP---DWKLGFGERAFSAAGAAFLSAILVNPLDVAKTRLQAQAAGVPYSHPLSNI 107

Query: 296 RGHLSSLGPK-----------------------------SYSGTLDVFYKI 361
              ++  GP                               Y GTLDVFYKI
Sbjct: 108 VSRMAYFGPNMMFADLRCSPSCARAGVHGTVSICPPDCFQYKGTLDVFYKI 158


>gb|AAL84928.1| At2g46320/F11C10.1 [Arabidopsis thaliana]
          Length = 361

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 41/113 (36%), Positives = 45/113 (39%), Gaps = 23/113 (20%)
 Frame = +2

Query: 92  VVSETMEGQNSSSLPTVKDSNLSFAERXXXXXXXXXXXXXXXNPLDVAKTRLQAEAAGVP 271
           +V E      S S+P   + NL F ER               NPLDV KTRLQA+AAGVP
Sbjct: 1   MVEEAQLDPKSKSIP---NENLKFGERALSAGGAAFISAVIVNPLDVVKTRLQAQAAGVP 57

Query: 272 YSHSHH-----------------------RFRGHLSSLGPKSYSGTLDVFYKI 361
           Y  S                         R  G  S      Y GTLDVFYKI
Sbjct: 58  YQGSCRLGCFDTNSTLVHDLRSNSAPGMCRITGSASVCSDNQYKGTLDVFYKI 110


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