BLASTX nr result
ID: Coptis21_contig00034782
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034782 (295 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002323847.1| multidrug/pheromone exporter, MDR family, AB... 121 7e-26 gb|AAP72956.1| putative MDR-like P-glycoprotein [Lactuca sativa] 116 2e-24 gb|ABX82929.1| LO4 [Solanum pennellii] 115 4e-24 ref|NP_001234209.1| L04 [Solanum lycopersicum] gi|162280535|gb|A... 115 4e-24 ref|XP_002877137.1| P-glycoprotein 19 [Arabidopsis lyrata subsp.... 112 2e-23 >ref|XP_002323847.1| multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] gi|222866849|gb|EEF03980.1| multidrug/pheromone exporter, MDR family, ABC transporter family [Populus trichocarpa] Length = 1251 Score = 121 bits (303), Expect = 7e-26 Identities = 59/85 (69%), Positives = 69/85 (81%) Frame = -3 Query: 257 MAETVEQQKEVVTDPENKMKKLKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPV 78 MAET E + + + E K KE SLPFY+LFSFADKYD+LLM+ GSIGA +HGS+MPV Sbjct: 1 MAETTEANRPSLPEAEKK----KEQSLPFYQLFSFADKYDWLLMISGSIGAIIHGSSMPV 56 Query: 77 FFLLFGEMVNGFGKNQSDLNQMTHQ 3 FFLLFGEMVNGFGKNQSDL +MTH+ Sbjct: 57 FFLLFGEMVNGFGKNQSDLYKMTHE 81 >gb|AAP72956.1| putative MDR-like P-glycoprotein [Lactuca sativa] Length = 1251 Score = 116 bits (290), Expect = 2e-24 Identities = 56/85 (65%), Positives = 66/85 (77%) Frame = -3 Query: 257 MAETVEQQKEVVTDPENKMKKLKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPV 78 MAET E K + E K KE S+PFY+LFSFADK+DY LM+ GSIGA +HGS+MP Sbjct: 1 MAETTEASKAMPAQAE----KRKEQSIPFYQLFSFADKFDYALMILGSIGAIIHGSSMPF 56 Query: 77 FFLLFGEMVNGFGKNQSDLNQMTHQ 3 FFLLFG+M+NGFGKNQSDLN MTH+ Sbjct: 57 FFLLFGQMINGFGKNQSDLNTMTHE 81 >gb|ABX82929.1| LO4 [Solanum pennellii] Length = 1249 Score = 115 bits (288), Expect = 4e-24 Identities = 60/85 (70%), Positives = 68/85 (80%) Frame = -3 Query: 257 MAETVEQQKEVVTDPENKMKKLKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPV 78 MAET E + PE + KK E SLPFY+LFSFADKYDYLLM GSIGA +HGS+MPV Sbjct: 1 MAETTEGKSM----PEAEKKK--EQSLPFYQLFSFADKYDYLLMTCGSIGAILHGSSMPV 54 Query: 77 FFLLFGEMVNGFGKNQSDLNQMTHQ 3 FFLLFGEMVNGFGKNQ DL++MTH+ Sbjct: 55 FFLLFGEMVNGFGKNQMDLHKMTHE 79 >ref|NP_001234209.1| L04 [Solanum lycopersicum] gi|162280535|gb|ABX82928.1| L04 [Solanum lycopersicum] Length = 1249 Score = 115 bits (288), Expect = 4e-24 Identities = 60/85 (70%), Positives = 68/85 (80%) Frame = -3 Query: 257 MAETVEQQKEVVTDPENKMKKLKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPV 78 MAET E + PE + KK E SLPFY+LFSFADKYDYLLM GSIGA +HGS+MPV Sbjct: 1 MAETTEGKSM----PEAEKKK--EQSLPFYQLFSFADKYDYLLMTCGSIGAILHGSSMPV 54 Query: 77 FFLLFGEMVNGFGKNQSDLNQMTHQ 3 FFLLFGEMVNGFGKNQ DL++MTH+ Sbjct: 55 FFLLFGEMVNGFGKNQMDLHKMTHE 79 >ref|XP_002877137.1| P-glycoprotein 19 [Arabidopsis lyrata subsp. lyrata] gi|297322975|gb|EFH53396.1| P-glycoprotein 19 [Arabidopsis lyrata subsp. lyrata] Length = 1252 Score = 112 bits (281), Expect = 2e-23 Identities = 55/77 (71%), Positives = 63/77 (81%) Frame = -3 Query: 233 KEVVTDPENKMKKLKENSLPFYKLFSFADKYDYLLMLGGSIGAFVHGSAMPVFFLLFGEM 54 K V T+ E K KE SLPF+KLFSFADK+DYLLM GS+GA VHGS+MPVFFLLFG+M Sbjct: 10 KTVPTEAEKK----KEQSLPFFKLFSFADKFDYLLMFVGSLGAIVHGSSMPVFFLLFGQM 65 Query: 53 VNGFGKNQSDLNQMTHQ 3 VNGFGKNQ DL+QM H+ Sbjct: 66 VNGFGKNQMDLHQMVHE 82