BLASTX nr result

ID: Coptis21_contig00034770 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034770
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   188   4e-46
ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|2...   184   6e-45
ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putat...   181   7e-44
ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   179   2e-43
ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   176   2e-42

>ref|XP_003633155.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Vitis
           vinifera]
          Length = 587

 Score =  188 bits (477), Expect = 4e-46
 Identities = 92/103 (89%), Positives = 98/103 (95%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSSQNMSKKV 182
           CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS +NMS+KV
Sbjct: 412 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSIRNMSRKV 471

Query: 183 DRYLQFPFSLDMSPYLSSSILRSRFGNRIFTF-GEDEDISTEL 308
           DRYLQFPFSLDM+PYLSSSILRSRFGNRIF+F G++ D S EL
Sbjct: 472 DRYLQFPFSLDMAPYLSSSILRSRFGNRIFSFDGDEPDASNEL 514


>ref|XP_002324616.1| predicted protein [Populus trichocarpa] gi|222866050|gb|EEF03181.1|
           predicted protein [Populus trichocarpa]
          Length = 566

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/103 (87%), Positives = 96/103 (93%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSSQNMSKKV 182
           CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS + MS+KV
Sbjct: 391 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSIRKMSRKV 450

Query: 183 DRYLQFPFSLDMSPYLSSSILRSRFGNRIFTF-GEDEDISTEL 308
           DRYLQFPFSLDM+PYLSSSILRSRFGNRIF F G++ D S E+
Sbjct: 451 DRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDEADASNEM 493


>ref|XP_002530760.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
           gi|223529676|gb|EEF31620.1| Ubiquitin carboxyl-terminal
           hydrolase, putative [Ricinus communis]
          Length = 577

 Score =  181 bits (458), Expect = 7e-44
 Identities = 88/103 (85%), Positives = 95/103 (92%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSSQNMSKKV 182
           CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLV CFHIKRFEHSS + MS+KV
Sbjct: 402 CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVYCFHIKRFEHSSIRKMSRKV 461

Query: 183 DRYLQFPFSLDMSPYLSSSILRSRFGNRIFTF-GEDEDISTEL 308
           DRYLQFPFSLDM+PYLSSSILR+RFGNRIF F G++ D S E+
Sbjct: 462 DRYLQFPFSLDMTPYLSSSILRNRFGNRIFPFDGDEPDASNEM 504


>ref|XP_004139406.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus] gi|449518463|ref|XP_004166261.1| PREDICTED:
           ubiquitin carboxyl-terminal hydrolase 22-like [Cucumis
           sativus]
          Length = 602

 Score =  179 bits (455), Expect = 2e-43
 Identities = 86/96 (89%), Positives = 91/96 (94%)
 Frame = +3

Query: 3   CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSSQNMSKKV 182
           CLD+FTRPE+LGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSS + MS+KV
Sbjct: 427 CLDQFTRPEKLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSVRKMSRKV 486

Query: 183 DRYLQFPFSLDMSPYLSSSILRSRFGNRIFTFGEDE 290
           DRYLQFPFSLDM+PYLSSSILRSRFGNRIF F  DE
Sbjct: 487 DRYLQFPFSLDMAPYLSSSILRSRFGNRIFPFDGDE 522


>ref|XP_003549730.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 22-like [Glycine
           max]
          Length = 592

 Score =  176 bits (446), Expect = 2e-42
 Identities = 86/103 (83%), Positives = 95/103 (92%), Gaps = 1/103 (0%)
 Frame = +3

Query: 3   CLDRFTRPERLGSDQKFFCQQCQVRQESLKQMSIRKLPLVSCFHIKRFEHSSSQNMSKKV 182
           CL RFTR ERLGSDQKFFC+QCQVRQE+LKQMSIRKLPLVSCFHIKRFEHSS++ MS+KV
Sbjct: 417 CLKRFTRAERLGSDQKFFCRQCQVRQETLKQMSIRKLPLVSCFHIKRFEHSSTRKMSRKV 476

Query: 183 DRYLQFPFSLDMSPYLSSSILRSRFGNRIFTF-GEDEDISTEL 308
           DRYLQFPFSLDMSPYLSS+ILR+RFGNRIF F G++ D S EL
Sbjct: 477 DRYLQFPFSLDMSPYLSSTILRNRFGNRIFPFDGDEPDASDEL 519


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