BLASTX nr result
ID: Coptis21_contig00034767
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034767 (457 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002531956.1| conserved hypothetical protein [Ricinus comm... 77 1e-12 ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|2... 68 9e-10 ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago t... 62 4e-08 gb|AFW85628.1| hypothetical protein ZEAMMB73_684501 [Zea mays] 62 6e-08 ref|XP_003561028.1| PREDICTED: uncharacterized protein LOC100838... 60 1e-07 >ref|XP_002531956.1| conserved hypothetical protein [Ricinus communis] gi|223528402|gb|EEF30438.1| conserved hypothetical protein [Ricinus communis] Length = 1038 Score = 77.4 bits (189), Expect = 1e-12 Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 4/156 (2%) Frame = +2 Query: 2 ILNKVLNKN---PDGDTEL-LKDKNQNLVFQRLCGEVAICLLTQLSDFDNEALSSKVSDA 169 +LN +++N D TE+ L KN +L F L G C+L ++ + + + Sbjct: 691 MLNWCIDENLSMTDRGTEVDLSYKNPDLDFLFLSGNAVSCVLEEILTAGCDDNKNNRVEP 750 Query: 170 DLFLSNSIRNSLEFIARYLRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHLRMKHHILSL 349 +F + I+N L F++R+L+LS D L VT RV SA+ F++ L +KH ILS Sbjct: 751 PIF--SDIKNVLAFVSRFLKLSSTRIQADPTIGLPVTSRVFSALARFMSCLHLKHTILST 808 Query: 350 MEICSDPLVQWLSIYAPMHVEMQEGSIVCQLELLWS 457 +EI + PL+QWLS H EM++GS QL LW+ Sbjct: 809 IEILTCPLIQWLS-----HREMRDGSTNDQLRDLWA 839 >ref|XP_002325200.1| predicted protein [Populus trichocarpa] gi|222866634|gb|EEF03765.1| predicted protein [Populus trichocarpa] Length = 1116 Score = 67.8 bits (164), Expect = 9e-10 Identities = 49/126 (38%), Positives = 65/126 (51%), Gaps = 2/126 (1%) Frame = +2 Query: 86 LCGEVAICLLTQ-LSDFDNEALSSKVSDA-DLFLSNSIRNSLEFIARYLRLSLGVTVRDA 259 L G C++ Q + ++ + V A D + I+NSLEF +R+L+LS + D Sbjct: 797 LSGTAVTCVMEQQILTLAASSVGNNVEHARDPKTFSGIKNSLEFSSRFLKLSWSMMEADP 856 Query: 260 ETDLSVTIRVLSAMTGFIAHLRMKHHILSLMEICSDPLVQWLSIYAPMHVEMQEGSIVCQ 439 T L VT RV S + F+ L K ILS +E S PL+QWLS H E QE S Q Sbjct: 857 STILFVTSRVFSVLVCFVRCLHTKPSILSFIETISCPLLQWLS-----HRETQEASTNEQ 911 Query: 440 LELLWS 457 L LWS Sbjct: 912 LHHLWS 917 >ref|XP_003609404.1| Telomere-associated protein RIF1 [Medicago truncatula] gi|355510459|gb|AES91601.1| Telomere-associated protein RIF1 [Medicago truncatula] Length = 1121 Score = 62.4 bits (150), Expect = 4e-08 Identities = 45/126 (35%), Positives = 64/126 (50%), Gaps = 2/126 (1%) Frame = +2 Query: 86 LCGEVAICLLTQLSDFD--NEALSSKVSDADLFLSNSIRNSLEFIARYLRLSLGVTVRDA 259 L G IC+L Q+ + +E SK S+ D + SI+N L F ++Y+ L V D Sbjct: 804 LSGNFLICILEQIQTLELVSETSRSK-SECDSKILYSIKNCLTFASKYMHLLRIKMVTDP 862 Query: 260 ETDLSVTIRVLSAMTGFIAHLRMKHHILSLMEICSDPLVQWLSIYAPMHVEMQEGSIVCQ 439 T R+ SA+ FI HL K IL +EI S PL+QWLS ++ +Q Sbjct: 863 PPSFVGTSRLSSALACFIDHLHRKQDILLFLEIISCPLLQWLS-----NMGVQNEGTNNN 917 Query: 440 LELLWS 457 L+LLW+ Sbjct: 918 LKLLWN 923 >gb|AFW85628.1| hypothetical protein ZEAMMB73_684501 [Zea mays] Length = 1418 Score = 61.6 bits (148), Expect = 6e-08 Identities = 43/140 (30%), Positives = 68/140 (48%), Gaps = 3/140 (2%) Frame = +2 Query: 44 ELLKDKNQNLVFQRLCGEVAICLLT--QLSDFDNEALSSKVSDADLFLSNSI-RNSLEFI 214 E L ++ +N GE+ I LL Q+ + N+ L D+ + + N + Sbjct: 1125 EHLSEEFENASVLSALGEIVIGLLQNDQMLTYANQELKETPEDSSVCRQPELFLNCFKLA 1184 Query: 215 ARYLRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHLRMKHHILSLMEICSDPLVQWLSIY 394 R+++LS + VT R S+++ F HL +K +L L EI D L +WLS+ Sbjct: 1185 NRFMKLSSFHFKANPAGQHQVTSRFFSSLSNFAGHLTLKEDVL-LFEIIGDQLTEWLSLS 1243 Query: 395 APMHVEMQEGSIVCQLELLW 454 ++ EMQ+G IV LE LW Sbjct: 1244 IILYSEMQQGQIVVHLENLW 1263 >ref|XP_003561028.1| PREDICTED: uncharacterized protein LOC100838247 [Brachypodium distachyon] Length = 800 Score = 60.5 bits (145), Expect = 1e-07 Identities = 40/140 (28%), Positives = 68/140 (48%), Gaps = 3/140 (2%) Frame = +2 Query: 44 ELLKDKNQNLVFQRLCGEVAICLLTQLSDFDNEALSSKVSD---ADLFLSNSIRNSLEFI 214 E +K +N+ + ++ I LL + + SKV+ A+ SN + + L+ Sbjct: 489 EYCSEKFKNITILSVLAKLVIELLVNARILNYASQGSKVTSEESAEGTRSNLLLSYLKLA 548 Query: 215 ARYLRLSLGVTVRDAETDLSVTIRVLSAMTGFIAHLRMKHHILSLMEICSDPLVQWLSIY 394 R++RLS + + VT R S+++ F+ HL IL L EI D +WL++ Sbjct: 549 NRFMRLSGLALKANPASQHQVTSRFFSSLSTFVGHLIWAKDILLLFEIIGDQFTEWLTLS 608 Query: 395 APMHVEMQEGSIVCQLELLW 454 + ++ MQ G + QLE LW Sbjct: 609 STLYCVMQRGETIDQLEKLW 628