BLASTX nr result

ID: Coptis21_contig00034752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034752
         (249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591419.1| Multidrug resistance protein ABC transporter...    82   4e-14
gb|AFK39923.1| unknown [Lotus japonicus]                               81   8e-14
ref|XP_002515299.1| conserved hypothetical protein [Ricinus comm...    81   1e-13
ref|XP_002301506.1| multidrug resistance protein ABC transporter...    81   1e-13
ref|XP_003536870.1| PREDICTED: uncharacterized protein LOC100784...    80   2e-13

>ref|XP_003591419.1| Multidrug resistance protein ABC transporter family protein
           [Medicago truncatula] gi|355480467|gb|AES61670.1|
           Multidrug resistance protein ABC transporter family
           protein [Medicago truncatula]
          Length = 192

 Score = 82.0 bits (201), Expect = 4e-14
 Identities = 38/58 (65%), Positives = 47/58 (81%)
 Frame = +2

Query: 71  VHEFKEPVTAAELMLEHPQQVVVEFKSLLAGKKPIPLPADKKLDTEKIYVMLHMKRGK 244
           VHEF E +T AELM++HPQ+VVVEF S +  K+P PLPADKKLD  KIY+ML +K+GK
Sbjct: 23  VHEFDEAITVAELMMDHPQKVVVEFHSAVNQKRPTPLPADKKLDMNKIYLMLPVKQGK 80


>gb|AFK39923.1| unknown [Lotus japonicus]
          Length = 196

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 42/59 (71%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
 Frame = +2

Query: 71  VHEFKEPVTAAELMLEHPQQVVVEFKSLL-AGKKPIPLPADKKLDTEKIYVMLHMKRGK 244
           V EF +P+T AELMLEHPQQVVVEF S L   K+P PLPADKKL+ +K YVML MKRGK
Sbjct: 24  VQEFDQPLTVAELMLEHPQQVVVEFHSALNHQKRPTPLPADKKLEMKKTYVMLPMKRGK 82


>ref|XP_002515299.1| conserved hypothetical protein [Ricinus communis]
           gi|223545779|gb|EEF47283.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 191

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 37/59 (62%), Positives = 49/59 (83%)
 Frame = +2

Query: 71  VHEFKEPVTAAELMLEHPQQVVVEFKSLLAGKKPIPLPADKKLDTEKIYVMLHMKRGKV 247
           VH F + +T AELMLE+PQQVVVEF+  L+ K+P PLPADKKL+ +K+Y++L MKRGK+
Sbjct: 23  VHAFDKSLTVAELMLEYPQQVVVEFQQNLSEKRPAPLPADKKLEAKKVYLILPMKRGKI 81


>ref|XP_002301506.1| multidrug resistance protein ABC transporter family protein
           [Populus trichocarpa] gi|222843232|gb|EEE80779.1|
           multidrug resistance protein ABC transporter family
           protein [Populus trichocarpa]
          Length = 197

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/58 (67%), Positives = 47/58 (81%)
 Frame = +2

Query: 71  VHEFKEPVTAAELMLEHPQQVVVEFKSLLAGKKPIPLPADKKLDTEKIYVMLHMKRGK 244
           V EF  P+TAAELMLE+PQQVVVEF S    K+P PLPADK+LD +K+Y+ML +KRGK
Sbjct: 27  VFEFDTPLTAAELMLEYPQQVVVEFHSDFTEKRPAPLPADKRLDLKKVYLMLPIKRGK 84


>ref|XP_003536870.1| PREDICTED: uncharacterized protein LOC100784884 [Glycine max]
          Length = 200

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/58 (62%), Positives = 46/58 (79%)
 Frame = +2

Query: 71  VHEFKEPVTAAELMLEHPQQVVVEFKSLLAGKKPIPLPADKKLDTEKIYVMLHMKRGK 244
           VHE ++ +T AELMLEHP+QVVVE  S +  K+P PLPAD KL+T K+Y+ML +KRGK
Sbjct: 24  VHEIEQSLTVAELMLEHPEQVVVELHSAVNNKRPTPLPADNKLETNKVYLMLPLKRGK 81


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