BLASTX nr result

ID: Coptis21_contig00034749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034749
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17999.3| unnamed protein product [Vitis vinifera]              173   1e-41
ref|XP_002319391.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34
ref|XP_002331921.1| predicted protein [Populus trichocarpa] gi|2...   147   9e-34
ref|XP_002305691.1| predicted protein [Populus trichocarpa] gi|2...   147   1e-33
ref|XP_002326104.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-32

>emb|CBI17999.3| unnamed protein product [Vitis vinifera]
          Length = 211

 Score =  173 bits (439), Expect = 1e-41
 Identities = 77/108 (71%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   PQQRKPLHAKVREIVKIGTSNHQVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGNF 180
           PQ RKPLH K+ E++  G SNHQ FGDPS L CM+LH +HPASW+SVAWYPIYRIPEGNF
Sbjct: 41  PQLRKPLHNKIMELINNGNSNHQAFGDPSKLACMKLHELHPASWFSVAWYPIYRIPEGNF 100

Query: 181 HASFLTYHSLGHLVQRC-IAEPLKGSQYCVISPVLGLQSYNAQGECWF 321
            ASFLTYHSLG+LVQRC   + L  +  C++ PVLGLQSYNAQGECWF
Sbjct: 101 RASFLTYHSLGYLVQRCNSTDSLNENMLCIVFPVLGLQSYNAQGECWF 148


>ref|XP_002319391.1| predicted protein [Populus trichocarpa] gi|222857767|gb|EEE95314.1|
           predicted protein [Populus trichocarpa]
          Length = 417

 Score =  148 bits (374), Expect = 4e-34
 Identities = 66/107 (61%), Positives = 80/107 (74%)
 Frame = +1

Query: 1   PQQRKPLHAKVREIVKIGTSNHQVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGNF 180
           P  RKPLH K+R+++ IGTSN QVFGDPS L+ M L ++HPA+W+SVAWYPIYRIPEG F
Sbjct: 248 PHVRKPLHLKIRDLISIGTSNLQVFGDPSKLESMNLQDLHPATWFSVAWYPIYRIPEGKF 307

Query: 181 HASFLTYHSLGHLVQRCIAEPLKGSQYCVISPVLGLQSYNAQGECWF 321
            ASFLTYH LG  V + I        + ++ PV+GLQSYN QGECWF
Sbjct: 308 SASFLTYHLLGQSVVQSIPIDSLSKMFQIVFPVIGLQSYNTQGECWF 354


>ref|XP_002331921.1| predicted protein [Populus trichocarpa] gi|222874593|gb|EEF11724.1|
            predicted protein [Populus trichocarpa]
          Length = 1150

 Score =  147 bits (371), Expect = 9e-34
 Identities = 62/108 (57%), Positives = 84/108 (77%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1    PQQRKPLHAKVREIVK-IGTSNHQVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGN 177
            PQQR+PL+ K++E+ +   +S ++++GDP+ L  + LH++HP SWYSVAWYPIYRIP+G+
Sbjct: 977  PQQRRPLYEKIQELARGDASSRYKMYGDPTNLASLNLHDLHPRSWYSVAWYPIYRIPDGH 1036

Query: 178  FHASFLTYHSLGHLVQRCIAEPLKGSQYCVISPVLGLQSYNAQGECWF 321
            F A+FLTYHSLGHLV +           C++SPV+GLQSYNAQGECWF
Sbjct: 1037 FRAAFLTYHSLGHLVHKSAEVDYASKDACIVSPVVGLQSYNAQGECWF 1084


>ref|XP_002305691.1| predicted protein [Populus trichocarpa] gi|222848655|gb|EEE86202.1|
            predicted protein [Populus trichocarpa]
          Length = 1132

 Score =  147 bits (370), Expect = 1e-33
 Identities = 64/108 (59%), Positives = 82/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1    PQQRKPLHAKVREIVKIGTSNH-QVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGN 177
            PQQR+P + K++E+V+   S+  +++GDP+ L  + LH++HP SWYSVAWYPIYRIP+GN
Sbjct: 959  PQQRQPFYEKIQELVRGNASSRCKMYGDPTNLASLNLHDLHPRSWYSVAWYPIYRIPDGN 1018

Query: 178  FHASFLTYHSLGHLVQRCIAEPLKGSQYCVISPVLGLQSYNAQGECWF 321
            F  +FLTYHSLGHLV R           CV+SPV+GLQSYNAQGECWF
Sbjct: 1019 FRTAFLTYHSLGHLVHRSAKFDSPSKNECVVSPVVGLQSYNAQGECWF 1066


>ref|XP_002326104.1| predicted protein [Populus trichocarpa] gi|222862979|gb|EEF00486.1|
           predicted protein [Populus trichocarpa]
          Length = 351

 Score =  143 bits (361), Expect = 1e-32
 Identities = 64/108 (59%), Positives = 81/108 (75%), Gaps = 1/108 (0%)
 Frame = +1

Query: 1   PQQRKPLHAKVREIVKIGTSNHQVFGDPSGLQCMQLHNIHPASWYSVAWYPIYRIPEGNF 180
           P  RKPLH K+R+++ I TSN QVFGDPS L+ M LH++HP+SW+SVAWYPIYRIPEG F
Sbjct: 175 PHDRKPLHLKIRDLISINTSNLQVFGDPSKLESMNLHDLHPSSWFSVAWYPIYRIPEGEF 234

Query: 181 HASFLTYHSLGHLVQRCI-AEPLKGSQYCVISPVLGLQSYNAQGECWF 321
           HA+FLTYHS   L+ R I  + L  +   ++ PV+GLQSY  +GE WF
Sbjct: 235 HAAFLTYHSFNQLIVRSIPIDSLSKTFQMIVFPVMGLQSYRIKGERWF 282


Top