BLASTX nr result

ID: Coptis21_contig00034723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034723
         (410 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327127.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002301193.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14
emb|CBI19539.3| unnamed protein product [Vitis vinifera]               77   2e-12
ref|XP_002284599.1| PREDICTED: uncharacterized protein LOC100264...    76   2e-12
emb|CAN63227.1| hypothetical protein VITISV_002666 [Vitis vinifera]    76   3e-12

>ref|XP_002327127.1| predicted protein [Populus trichocarpa] gi|222835442|gb|EEE73877.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 44/104 (42%), Positives = 63/104 (60%)
 Frame = -2

Query: 316 MSFFTYEEPKQYSKPCKYFHSCLKDALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIV 137
           MS F +EEP  +SK CK+  + LKD  ++C   GG+ ST   +EE+   D DD+QE ++ 
Sbjct: 1   MSVFYHEEPPNHSKKCKFLAATLKDVFSNCSACGGQISTPGPEEEYPTTDVDDDQEIIVS 60

Query: 136 TIRTRSLEAKLRRRGPLTMNQSFTSILSATAGELFIASKGVQHK 5
            IR+R++E KLR + P     SF+ + S   GELF+  K VQ K
Sbjct: 61  EIRSRAME-KLRHK-PFVFTDSFSWVYSPMTGELFVTPKAVQQK 102


>ref|XP_002301193.1| predicted protein [Populus trichocarpa] gi|222842919|gb|EEE80466.1|
           predicted protein [Populus trichocarpa]
          Length = 208

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 44/104 (42%), Positives = 60/104 (57%)
 Frame = -2

Query: 316 MSFFTYEEPKQYSKPCKYFHSCLKDALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIV 137
           M  F +EE    SK CK+  + LKD  ++C   GGR ST   +EE+   D DDEQE ++ 
Sbjct: 1   MGVFHHEEAPNPSKKCKFLAATLKDVFSNCSTCGGRISTSSPEEEYPTADVDDEQEVIVS 60

Query: 136 TIRTRSLEAKLRRRGPLTMNQSFTSILSATAGELFIASKGVQHK 5
            IR+R++E KLR + P     SF+ + S   GELF+  K VQ K
Sbjct: 61  EIRSRAME-KLRHK-PFIFTDSFSWVYSPKTGELFVTPKAVQQK 102


>emb|CBI19539.3| unnamed protein product [Vitis vinifera]
          Length = 240

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
 Frame = -2

Query: 319 NMSFFTYEEPKQYSKPCKYFHSCLKDALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVI 140
           ++ F+  ++P   SK CK   + LK+A ++CH FGG+  +   DEE+   D DDE+E V+
Sbjct: 32  SIMFYNEDQPNP-SKRCKCLAAALKEAFSNCHAFGGKLPSASPDEENPPSDVDDEEEVVV 90

Query: 139 VTIRTRSLEAKLRRRGPLTMN----QSFTSILSATAGELFIASKGVQHK 5
             IR+++ EAKLRR+  L  +     SF+ + S   GELF   K +Q +
Sbjct: 91  SAIRSKAREAKLRRKTSLLSDSFKLDSFSRVFSPRTGELFATPKELQQR 139


>ref|XP_002284599.1| PREDICTED: uncharacterized protein LOC100264238 [Vitis vinifera]
          Length = 207

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
 Frame = -2

Query: 310 FFTYEEPKQYSKPCKYFHSCLKDALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVIVTI 131
           F+  ++P   SK CK   + LK+A ++CH FGG+  +   DEE+   D DDE+E V+  I
Sbjct: 2   FYNEDQPNP-SKRCKCLAAALKEAFSNCHAFGGKLPSASPDEENPPSDVDDEEEVVVSAI 60

Query: 130 RTRSLEAKLRRRGPLTMN----QSFTSILSATAGELFIASKGVQHK 5
           R+++ EAKLRR+  L  +     SF+ + S   GELF   K +Q +
Sbjct: 61  RSKAREAKLRRKTSLLSDSFKLDSFSRVFSPRTGELFATPKELQQR 106


>emb|CAN63227.1| hypothetical protein VITISV_002666 [Vitis vinifera]
          Length = 146

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/109 (37%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
 Frame = -2

Query: 319 NMSFFTYEEPKQYSKPCKYFHSCLKDALAHCHKFGGRSSTLDLDEEHSLGDTDDEQERVI 140
           ++ F+  ++P   SK CK   + LK+A ++CH FGG+  +   DEE+   D DDE+E V+
Sbjct: 27  SIMFYNEDQPNP-SKRCKCLAAALKEAFSNCHAFGGKLPSASPDEENPPSDVDDEEEVVV 85

Query: 139 VTIRTRSLEAKLRRRGPLTMN----QSFTSILSATAGELFIASKGVQHK 5
             IR+++ EAKLRR+  L        SF+ + S   GELF   K +Q +
Sbjct: 86  SAIRSKAREAKLRRKTSLJSXSFKLDSFSRVFSPRTGELFATPKELQQR 134