BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034717
         (238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002875507.1| hypothetical protein ARALYDRAFT_484700 [Arab...   112   2e-23
ref|NP_189575.2| pentatricopeptide repeat-containing protein [Ar...   110   1e-22
dbj|BAB03125.1| unnamed protein product [Arabidopsis thaliana]        110   1e-22
emb|CBI22283.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containi...   106   2e-21

>ref|XP_002875507.1| hypothetical protein ARALYDRAFT_484700 [Arabidopsis lyrata subsp.
           lyrata] gi|297321345|gb|EFH51766.1| hypothetical protein
           ARALYDRAFT_484700 [Arabidopsis lyrata subsp. lyrata]
          Length = 498

 Score =  112 bits (281), Expect = 2e-23
 Identities = 55/79 (69%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 FVRCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 59
           FVRCG++ELA DAY EMV  K+ P ED M AMIS CTKEEKW LA  IFQ+MLK G+ PN
Sbjct: 217 FVRCGRSELALDAYDEMVNYKISPREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPN 276

Query: 58  IVAYNSLINSLGKAGEVEL 2
           +VA N+LINSLGKAG+V L
Sbjct: 277 LVACNTLINSLGKAGKVGL 295


>ref|NP_189575.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75146586|sp|Q84J46.1|PP262_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g29290; AltName: Full=Protein EMBRYO DEFECTIVE 2076
           gi|28393331|gb|AAO42091.1| unknown protein [Arabidopsis
           thaliana] gi|28827658|gb|AAO50673.1| unknown protein
           [Arabidopsis thaliana] gi|332644042|gb|AEE77563.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 540

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = -1

Query: 238 FVRCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 59
           FVRCG++ELA D Y EMV NK+   ED M AMIS CTKEEKW LA  IFQ+MLK G+ PN
Sbjct: 259 FVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPN 318

Query: 58  IVAYNSLINSLGKAGEVEL 2
           +VA N+LINSLGKAG+V L
Sbjct: 319 LVACNTLINSLGKAGKVGL 337


>dbj|BAB03125.1| unnamed protein product [Arabidopsis thaliana]
          Length = 498

 Score =  110 bits (275), Expect = 1e-22
 Identities = 54/79 (68%), Positives = 62/79 (78%)
 Frame = -1

Query: 238 FVRCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 59
           FVRCG++ELA D Y EMV NK+   ED M AMIS CTKEEKW LA  IFQ+MLK G+ PN
Sbjct: 217 FVRCGRSELALDVYDEMVNNKISLREDAMYAMISACTKEEKWDLALKIFQSMLKKGMKPN 276

Query: 58  IVAYNSLINSLGKAGEVEL 2
           +VA N+LINSLGKAG+V L
Sbjct: 277 LVACNTLINSLGKAGKVGL 295


>emb|CBI22283.3| unnamed protein product [Vitis vinifera]
          Length = 626

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/79 (62%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 FVRCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 59
           FVRCGQ ELA DAYSEM++N L+P ED M+A+I  C KE KW LA ++FQ+ML  GL PN
Sbjct: 333 FVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPN 392

Query: 58  IVAYNSLINSLGKAGEVEL 2
           ++A N+LINS+GK+G V+L
Sbjct: 393 LIACNALINSIGKSGNVKL 411


>ref|XP_002279015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29290-like [Vitis vinifera]
          Length = 546

 Score =  106 bits (264), Expect = 2e-21
 Identities = 49/79 (62%), Positives = 63/79 (79%)
 Frame = -1

Query: 238 FVRCGQAELAFDAYSEMVRNKLEPSEDMMQAMISTCTKEEKWGLAHNIFQTMLKSGLYPN 59
           FVRCGQ ELA DAYSEM++N L+P ED M+A+I  C KE KW LA ++FQ+ML  GL PN
Sbjct: 253 FVRCGQNELAIDAYSEMIQNGLKPGEDAMKAIIGACAKEGKWDLALSVFQSMLNVGLKPN 312

Query: 58  IVAYNSLINSLGKAGEVEL 2
           ++A N+LINS+GK+G V+L
Sbjct: 313 LIACNALINSIGKSGNVKL 331