BLASTX nr result

ID: Coptis21_contig00034716 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034716
         (257 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vi...    87   1e-15
emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]    87   2e-15
ref|XP_002510276.1| conserved hypothetical protein [Ricinus comm...    83   2e-14
gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [C...    75   4e-12
ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cu...    73   3e-11

>ref|XP_002282264.2| PREDICTED: CST complex subunit CTC1-like [Vitis vinifera]
          Length = 1215

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 39/78 (50%), Positives = 55/78 (70%)
 Frame = -1

Query: 236 NVSGFLAEVLVCKCKLCRSKVSVKTLCSSVGGKNGHLFDVSVIVYFFESASSWHPVMSKL 57
           N+ GFLA+++VC+C+LC SK  + +L     G  GH F    I+YF  S SSWHP+ +KL
Sbjct: 235 NLRGFLAQIMVCECELCCSKEGLMSLDDPRKGLRGHCFTKPQILYFCGSGSSWHPLFTKL 294

Query: 56  VGNVVSVSGLKKKLIYIG 3
           +GNV+ +S LKKKL++IG
Sbjct: 295 IGNVICISHLKKKLVFIG 312


>emb|CAN78397.1| hypothetical protein VITISV_011909 [Vitis vinifera]
          Length = 1618

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 39/78 (50%), Positives = 55/78 (70%)
 Frame = -1

Query: 236 NVSGFLAEVLVCKCKLCRSKVSVKTLCSSVGGKNGHLFDVSVIVYFFESASSWHPVMSKL 57
           N+ GFLA+++VC+C+LC SK  + +L     G  GH F    I+YF  S SSWHP+ +KL
Sbjct: 377 NLRGFLAQIMVCECELCCSKEVLMSLDDPRKGLRGHCFTKPQILYFCGSGSSWHPLFTKL 436

Query: 56  VGNVVSVSGLKKKLIYIG 3
           +GNV+ +S LKKKL++IG
Sbjct: 437 IGNVICISHLKKKLVFIG 454


>ref|XP_002510276.1| conserved hypothetical protein [Ricinus communis]
           gi|223550977|gb|EEF52463.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 1159

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/80 (50%), Positives = 56/80 (70%)
 Frame = -1

Query: 242 SRNVSGFLAEVLVCKCKLCRSKVSVKTLCSSVGGKNGHLFDVSVIVYFFESASSWHPVMS 63
           S+N+ GF+A++ VC+CKLC SK  +K        +  H+F     VYFF S+ SWHPV++
Sbjct: 201 SKNLRGFIAQIRVCECKLCISKEPIKP------EQQTHVFTKPSFVYFFGSSMSWHPVIT 254

Query: 62  KLVGNVVSVSGLKKKLIYIG 3
           KLV  VV++SGLKKKL++IG
Sbjct: 255 KLVRKVVTLSGLKKKLVFIG 274


>gb|AFP73234.1| CST complex subunit CTC1-like protein, partial [Carica papaya]
          Length = 409

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 38/84 (45%), Positives = 52/84 (61%)
 Frame = -1

Query: 254 DSTGSRNVSGFLAEVLVCKCKLCRSKVSVKTLCSSVGGKNGHLFDVSVIVYFFESASSWH 75
           DS+   N+ GFL  ++ C+C LC S+  +  L  S      H F   + +YF  SAS WH
Sbjct: 208 DSSAPVNIRGFLVRIIACECNLCASRELMAVLHDSTFR---HSFTKPLFIYFCGSASCWH 264

Query: 74  PVMSKLVGNVVSVSGLKKKLIYIG 3
           PV++KLVG VV +S LKKKLI++G
Sbjct: 265 PVITKLVGGVVLLSRLKKKLIFMG 288


>ref|XP_004160622.1| PREDICTED: CST complex subunit CTC1-like [Cucumis sativus]
          Length = 1362

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/84 (45%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
 Frame = -1

Query: 251 STGSRNVSGFLAEVLVCKCKLCRSKVSVKTLCSSVGGKNGHLFDVSVIVYFFESASSWHP 72
           S  S+ + GF+A +++C+C+ C SK  +    +SV   N H F    IVY   SASSWHP
Sbjct: 216 SAVSKKLRGFMAHIMICECRSCTSKEPMSLPDNSVRELNTHSFVNPTIVYLCGSASSWHP 275

Query: 71  VMSKLVG-NVVSVSGLKKKLIYIG 3
           V+SK VG   ++  GLKKKL+ IG
Sbjct: 276 VLSKFVGLGFINFWGLKKKLVSIG 299


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