BLASTX nr result

ID: Coptis21_contig00034708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034708
         (400 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...    92   6e-17
gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]                       70   2e-10
emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera]    65   4e-09
emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]    64   1e-08
emb|CAN62803.1| hypothetical protein VITISV_011794 [Vitis vinifera]    59   4e-07

>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 2/85 (2%)
 Frame = +1

Query: 151  AAGFVAQSGISNSALI--AFTGNSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNG 324
            A+GFVA+SG S S       T +++WIIDTGAT HMTC++Y F H SS+    VI N NG
Sbjct: 801  ASGFVAKSGTSQSVCCFSVVTCDNEWIIDTGATHHMTCNKYMFTHLSSNSPVRVIINANG 860

Query: 325  VSYPVVGVGTVPLSHFLSIHDVLFV 399
            VS  V+G+GTV +S  LS++DVLFV
Sbjct: 861  VSSHVMGIGTVSISPSLSLYDVLFV 885


>gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa]
          Length = 1180

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 33/66 (50%), Positives = 49/66 (74%)
 Frame = +1

Query: 202 FTGNSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGVGTVPLSHFLSI 381
           FTG+  WIID+GA+DHMT D+  F   SS  S S ++N NGVS+PV+G+G++ ++  + +
Sbjct: 38  FTGSDTWIIDSGASDHMTYDKSFFVSMSSP-SISHVSNANGVSFPVLGIGSIQVTPSIVL 96

Query: 382 HDVLFV 399
           HDVL+V
Sbjct: 97  HDVLYV 102


>emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera]
          Length = 1077

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 30/68 (44%), Positives = 45/68 (66%)
 Frame = +1

Query: 196 IAFTGNSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGVGTVPLSHFL 375
           ++   + DWI+D+GAT+HMT D   F++ ++    S + N NGV+YPV G GTV LSH L
Sbjct: 184 VSHKDDEDWILDSGATBHMTFDSKDFSN-TTQPRXSCVANANGVTYPVXGXGTVTLSHSL 242

Query: 376 SIHDVLFV 399
           S+ + L +
Sbjct: 243 SLSNTLLI 250


>emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera]
          Length = 1625

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 31/63 (49%), Positives = 43/63 (68%)
 Frame = +1

Query: 211 NSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGVGTVPLSHFLSIHDV 390
           + DWI+D+GATDHMT D   F++ ++   +S + N NGV+YPV G GTV LS  LS+ + 
Sbjct: 353 DEDWILDSGATDHMTFDSKDFSN-TTQPRRSCVANANGVTYPVTGAGTVTLSPSLSLSNT 411

Query: 391 LFV 399
           L V
Sbjct: 412 LLV 414


>emb|CAN62803.1| hypothetical protein VITISV_011794 [Vitis vinifera]
          Length = 293

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
 Frame = +1

Query: 175 GISNSALIAFTGNSD--WIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGV 348
           G S  AL   T N+D  WI+++ ATDHMT D   F++ ++   +S +TN NGV+Y + G 
Sbjct: 188 GTSGKALHISTHNNDDDWILNSSATDHMTFDSNDFSN-ATQPRRSYVTNANGVTYXITGA 246

Query: 349 GTVPLSHFLSIHDVLFV 399
           GTV LS   S+   L V
Sbjct: 247 GTVTLSPSFSLSKTLLV 263


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