BLASTX nr result
ID: Coptis21_contig00034708
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034708 (400 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|... 92 6e-17 gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] 70 2e-10 emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera] 65 4e-09 emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera] 64 1e-08 emb|CAN62803.1| hypothetical protein VITISV_011794 [Vitis vinifera] 59 4e-07 >ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1| Beta-galactosidase [Medicago truncatula] Length = 2260 Score = 91.7 bits (226), Expect = 6e-17 Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 2/85 (2%) Frame = +1 Query: 151 AAGFVAQSGISNSALI--AFTGNSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNG 324 A+GFVA+SG S S T +++WIIDTGAT HMTC++Y F H SS+ VI N NG Sbjct: 801 ASGFVAKSGTSQSVCCFSVVTCDNEWIIDTGATHHMTCNKYMFTHLSSNSPVRVIINANG 860 Query: 325 VSYPVVGVGTVPLSHFLSIHDVLFV 399 VS V+G+GTV +S LS++DVLFV Sbjct: 861 VSSHVMGIGTVSISPSLSLYDVLFV 885 >gb|AFP55546.1| gag-pol polyprotein [Rosa rugosa] Length = 1180 Score = 70.1 bits (170), Expect = 2e-10 Identities = 33/66 (50%), Positives = 49/66 (74%) Frame = +1 Query: 202 FTGNSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGVGTVPLSHFLSI 381 FTG+ WIID+GA+DHMT D+ F SS S S ++N NGVS+PV+G+G++ ++ + + Sbjct: 38 FTGSDTWIIDSGASDHMTYDKSFFVSMSSP-SISHVSNANGVSFPVLGIGSIQVTPSIVL 96 Query: 382 HDVLFV 399 HDVL+V Sbjct: 97 HDVLYV 102 >emb|CAN68398.1| hypothetical protein VITISV_007896 [Vitis vinifera] Length = 1077 Score = 65.5 bits (158), Expect = 4e-09 Identities = 30/68 (44%), Positives = 45/68 (66%) Frame = +1 Query: 196 IAFTGNSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGVGTVPLSHFL 375 ++ + DWI+D+GAT+HMT D F++ ++ S + N NGV+YPV G GTV LSH L Sbjct: 184 VSHKDDEDWILDSGATBHMTFDSKDFSN-TTQPRXSCVANANGVTYPVXGXGTVTLSHSL 242 Query: 376 SIHDVLFV 399 S+ + L + Sbjct: 243 SLSNTLLI 250 >emb|CAN75051.1| hypothetical protein VITISV_020117 [Vitis vinifera] Length = 1625 Score = 64.3 bits (155), Expect = 1e-08 Identities = 31/63 (49%), Positives = 43/63 (68%) Frame = +1 Query: 211 NSDWIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGVGTVPLSHFLSIHDV 390 + DWI+D+GATDHMT D F++ ++ +S + N NGV+YPV G GTV LS LS+ + Sbjct: 353 DEDWILDSGATDHMTFDSKDFSN-TTQPRRSCVANANGVTYPVTGAGTVTLSPSLSLSNT 411 Query: 391 LFV 399 L V Sbjct: 412 LLV 414 >emb|CAN62803.1| hypothetical protein VITISV_011794 [Vitis vinifera] Length = 293 Score = 58.9 bits (141), Expect = 4e-07 Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 2/77 (2%) Frame = +1 Query: 175 GISNSALIAFTGNSD--WIIDTGATDHMTCDRYKFNHFSSSCSKSVITNVNGVSYPVVGV 348 G S AL T N+D WI+++ ATDHMT D F++ ++ +S +TN NGV+Y + G Sbjct: 188 GTSGKALHISTHNNDDDWILNSSATDHMTFDSNDFSN-ATQPRRSYVTNANGVTYXITGA 246 Query: 349 GTVPLSHFLSIHDVLFV 399 GTV LS S+ L V Sbjct: 247 GTVTLSPSFSLSKTLLV 263