BLASTX nr result

ID: Coptis21_contig00034679 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034679
         (200 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   101   7e-20
ref|XP_004171633.1| PREDICTED: tubulin beta-7 chain-like [Cucumi...   101   7e-20
ref|XP_004161837.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   101   7e-20
ref|XP_004159949.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   101   7e-20
ref|XP_004152649.1| PREDICTED: tubulin beta-1 chain-like [Cucumi...   101   7e-20

>ref|XP_004172348.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 446

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -2

Query: 199 GFQDCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 20
           GFQ CH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ
Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191

Query: 19  LVENAD 2
           LVENAD
Sbjct: 192 LVENAD 197


>ref|XP_004171633.1| PREDICTED: tubulin beta-7 chain-like [Cucumis sativus]
          Length = 323

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -2

Query: 199 GFQDCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 20
           GFQ CH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ
Sbjct: 12  GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 71

Query: 19  LVENAD 2
           LVENAD
Sbjct: 72  LVENAD 77


>ref|XP_004161837.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 445

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -2

Query: 199 GFQDCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 20
           GFQ CH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ
Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191

Query: 19  LVENAD 2
           LVENAD
Sbjct: 192 LVENAD 197


>ref|XP_004159949.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 445

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -2

Query: 199 GFQDCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 20
           GFQ CH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ
Sbjct: 132 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 191

Query: 19  LVENAD 2
           LVENAD
Sbjct: 192 LVENAD 197


>ref|XP_004152649.1| PREDICTED: tubulin beta-1 chain-like [Cucumis sativus]
          Length = 449

 Score =  101 bits (251), Expect = 7e-20
 Identities = 52/66 (78%), Positives = 52/66 (78%)
 Frame = -2

Query: 199 GFQDCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 20
           GFQ CH             LISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ
Sbjct: 134 GFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQ 193

Query: 19  LVENAD 2
           LVENAD
Sbjct: 194 LVENAD 199


Top