BLASTX nr result

ID: Coptis21_contig00034671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034671
         (285 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321011.1| multidrug resistance protein ABC transporter...   146   2e-33
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   143   2e-32
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   141   6e-32
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   135   3e-30
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   133   2e-29

>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  146 bits (368), Expect = 2e-33
 Identities = 66/94 (70%), Positives = 83/94 (88%)
 Frame = +2

Query: 2   IKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVTTLAFGTAMLLGFP 181
           IKFQAWE++F KR+QDFRD+E+ W+SKF++SIS N + +WSTP++V+TL FGTA+LLG P
Sbjct: 517 IKFQAWEDHFNKRIQDFRDSEFGWISKFLYSISINTIVMWSTPLLVSTLTFGTALLLGVP 576

Query: 182 LDAGTVFTATSLFKILQEPIWGFPQALISTSQAM 283
           LDAGTVFT TS+FK+LQEPI  FPQA+IS SQAM
Sbjct: 577 LDAGTVFTTTSIFKMLQEPIRVFPQAMISLSQAM 610


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1508

 Score =  143 bits (360), Expect = 2e-32
 Identities = 64/94 (68%), Positives = 82/94 (87%)
 Frame = +2

Query: 2   IKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVTTLAFGTAMLLGFP 181
           IKFQAWEE+F KR+Q+FR++E+ W+SKF++SIS N + +WS P++V+TL FGTA+LLG P
Sbjct: 518 IKFQAWEEHFNKRIQNFRESEFGWISKFLYSISGNIIVMWSAPLLVSTLTFGTALLLGVP 577

Query: 182 LDAGTVFTATSLFKILQEPIWGFPQALISTSQAM 283
           LDAGTVFT TS+FKILQEPI  FPQ++IS SQAM
Sbjct: 578 LDAGTVFTTTSVFKILQEPIRTFPQSMISLSQAM 611


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  141 bits (355), Expect = 6e-32
 Identities = 61/94 (64%), Positives = 81/94 (86%)
 Frame = +2

Query: 2   IKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVTTLAFGTAMLLGFP 181
           IKFQAWEE+F KR+Q+FR++E+ WLSKFM+S+S N + +W TP++++T+ FGTA+L G P
Sbjct: 516 IKFQAWEEHFNKRIQNFRESEFEWLSKFMYSVSGNIIVMWCTPLLISTVTFGTALLFGVP 575

Query: 182 LDAGTVFTATSLFKILQEPIWGFPQALISTSQAM 283
           LDAGTVFT TS+FKILQ+PI  FPQ++IS SQAM
Sbjct: 576 LDAGTVFTTTSIFKILQDPIRSFPQSMISFSQAM 609


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  135 bits (341), Expect = 3e-30
 Identities = 60/94 (63%), Positives = 78/94 (82%)
 Frame = +2

Query: 2   IKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVTTLAFGTAMLLGFP 181
           IKFQAWEE+F KR+Q FR++E+ WL+KFM+SIS N + +WSTP++++   F TA++LG  
Sbjct: 518 IKFQAWEEHFNKRIQSFRESEFGWLTKFMYSISGNIIVMWSTPLMISAFTFATAIMLGVQ 577

Query: 182 LDAGTVFTATSLFKILQEPIWGFPQALISTSQAM 283
           LDAGTVFT TS+FKILQEPI  FPQ++IS SQAM
Sbjct: 578 LDAGTVFTTTSIFKILQEPIRAFPQSMISISQAM 611


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score =  133 bits (334), Expect = 2e-29
 Identities = 61/94 (64%), Positives = 76/94 (80%)
 Frame = +2

Query: 2   IKFQAWEEYFYKRVQDFRDAEYNWLSKFMFSISANFVFLWSTPVIVTTLAFGTAMLLGFP 181
           IKFQAWE +F KR+  FRD E+ WLSKF++SI+AN + LWSTPV+++ L F TA+ LG  
Sbjct: 522 IKFQAWENHFNKRILKFRDMEFGWLSKFLYSIAANIIVLWSTPVLISALTFATALALGVK 581

Query: 182 LDAGTVFTATSLFKILQEPIWGFPQALISTSQAM 283
           LDAGTVFT T++FKILQEPI  FPQ++IS SQAM
Sbjct: 582 LDAGTVFTTTTIFKILQEPIRTFPQSMISLSQAM 615


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