BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034630
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   139   2e-31
emb|CBI32069.3| unnamed protein product [Vitis vinifera]              139   2e-31
ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago tr...   124   6e-27
gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benth...   119   2e-25
ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   119   3e-25

>ref|XP_002267766.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Vitis vinifera]
          Length = 1174

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/107 (64%), Positives = 80/107 (74%)
 Frame = -2

Query: 321 QDYGSRRRNFGKREKEQTYNRGPNMSGQSPLSKNDINALRRSQVPQVRDTLRHLKARDML 142
           +D  SRRRN  KRE + +Y+   ++ GQS LSKNDIN +RRSQVPQV DTL HLKARDML
Sbjct: 381 KDERSRRRNLKKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDML 440

Query: 141 PAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXLKKFRIQYPDA 1
           PAIWFIFSRKGCDA+VQY+EDCN             LK+FR+QYPDA
Sbjct: 441 PAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDA 487


>emb|CBI32069.3| unnamed protein product [Vitis vinifera]
          Length = 1064

 Score =  139 bits (350), Expect = 2e-31
 Identities = 69/107 (64%), Positives = 80/107 (74%)
 Frame = -2

Query: 321 QDYGSRRRNFGKREKEQTYNRGPNMSGQSPLSKNDINALRRSQVPQVRDTLRHLKARDML 142
           +D  SRRRN  KRE + +Y+   ++ GQS LSKNDIN +RRSQVPQV DTL HLKARDML
Sbjct: 271 KDERSRRRNLKKRESDMSYSSFASIHGQSSLSKNDINTIRRSQVPQVMDTLWHLKARDML 330

Query: 141 PAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXLKKFRIQYPDA 1
           PAIWFIFSRKGCDA+VQY+EDCN             LK+FR+QYPDA
Sbjct: 331 PAIWFIFSRKGCDASVQYLEDCNLLDESEMSEVDLALKRFRLQYPDA 377


>ref|XP_003613437.1| ATP-dependent RNA helicase DOB1 [Medicago truncatula]
           gi|355514772|gb|AES96395.1| ATP-dependent RNA helicase
           DOB1 [Medicago truncatula]
          Length = 1201

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/107 (59%), Positives = 74/107 (69%)
 Frame = -2

Query: 321 QDYGSRRRNFGKREKEQTYNRGPNMSGQSPLSKNDINALRRSQVPQVRDTLRHLKARDML 142
           +D   R+RN  KR    +Y+    M  Q  LSKNDINA+RRSQVPQ+ DTL HL++RDML
Sbjct: 404 KDDWPRKRNSRKRGTRTSYDIDDRMLEQRSLSKNDINAIRRSQVPQIIDTLWHLQSRDML 463

Query: 141 PAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXLKKFRIQYPDA 1
           PA+WFIFSRKGCDAAVQYVEDC              LK+FRIQYPDA
Sbjct: 464 PAVWFIFSRKGCDAAVQYVEDCKLLDECEASEVLLALKRFRIQYPDA 510


>gb|ADE05573.1| increased size exclusion limit 2 [Nicotiana benthamiana]
          Length = 1159

 Score =  119 bits (299), Expect = 2e-25
 Identities = 63/107 (58%), Positives = 72/107 (67%)
 Frame = -2

Query: 321 QDYGSRRRNFGKREKEQTYNRGPNMSGQSPLSKNDINALRRSQVPQVRDTLRHLKARDML 142
           ++ GS+RR   KRE +             PLSKNDIN +RRSQVPQ+ DTL HLKARDML
Sbjct: 378 KEEGSKRRKSRKRENDVR-----------PLSKNDINNIRRSQVPQIIDTLWHLKARDML 426

Query: 141 PAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXLKKFRIQYPDA 1
           PA+WFIFSRKGCDAAVQY+EDC              LK+FRIQYPDA
Sbjct: 427 PAVWFIFSRKGCDAAVQYLEDCRLLDECETSEVELALKRFRIQYPDA 473


>ref|XP_004157336.1| PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2,
           chloroplastic-like [Cucumis sativus]
          Length = 1168

 Score =  119 bits (297), Expect = 3e-25
 Identities = 61/107 (57%), Positives = 76/107 (71%)
 Frame = -2

Query: 321 QDYGSRRRNFGKREKEQTYNRGPNMSGQSPLSKNDINALRRSQVPQVRDTLRHLKARDML 142
           +D GSRRR   +R  E +Y+   +MS Q+ LSKNDIN++RRS VPQV DTL  LK++DML
Sbjct: 384 KDDGSRRRTPKRRGNEISYDNIGSMSRQATLSKNDINSIRRSNVPQVIDTLWQLKSKDML 443

Query: 141 PAIWFIFSRKGCDAAVQYVEDCNXXXXXXXXXXXXXLKKFRIQYPDA 1
           PA+WFIFSRKGCDAAVQY++  N             L+KFRIQ+PDA
Sbjct: 444 PAVWFIFSRKGCDAAVQYIDSSNLLDDCERSEVELALRKFRIQFPDA 490