BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034613
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [M...    93   3e-17
ref|NP_200669.1| putative PHD finger transcription factor [Arabi...    90   2e-16
dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]         90   2e-16
ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arab...    87   2e-15
ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243...    86   2e-15

>ref|XP_003615709.1| Chromodomain helicase-DNA-binding protein [Medicago truncatula]
           gi|355517044|gb|AES98667.1| Chromodomain
           helicase-DNA-binding protein [Medicago truncatula]
          Length = 1144

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 49/108 (45%), Positives = 67/108 (62%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   LDDNSCAKRTESVSVSSILDGVENADDMDSLNLKHCRATIIRPIPPLLS--VKELCYGLC 174
           LDD       E V VSS+LDGV ++  +D       +  +IRP+PP +   +K+L +G C
Sbjct: 64  LDDEESDYLIEVVDVSSVLDGVNSSSALDC----SYQRGLIRPLPPPIELLIKDLPFGQC 119

Query: 175 VDVCINNVWWEGVIFDSEDGCEERLIFLPELCDEQKFCIGQLRITQEW 318
           VDV   + WWEGVIFD  +G ++R IF P+L DE K  + QLRITQ+W
Sbjct: 120 VDVKYQDAWWEGVIFDRCNGMKDRSIFFPDLGDEMKVGVKQLRITQDW 167


>ref|NP_200669.1| putative PHD finger transcription factor [Arabidopsis thaliana]
           gi|332009693|gb|AED97076.1| putative PHD finger
           transcription factor [Arabidopsis thaliana]
          Length = 1065

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   LDDNSCAKRTESVSVSSILDGVENADDMDSLNLKHCRATIIRPIPPLLSVKEL--CYGLC 174
           L D+      E+V VS I++G+++  D+            +RP+PP L V +L   YGLC
Sbjct: 58  LSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGR-----LRPVPPKLDVAKLNLAYGLC 112

Query: 175 VDVCINNVWWEGVIFDSEDGCEERLIFLPELCDEQKFCIGQLRITQEW 318
           VDV  ++ WWEGV+FD E+G E+R +F P+L DE    +  LRITQ+W
Sbjct: 113 VDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDW 160


>dbj|BAA97331.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1095

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   LDDNSCAKRTESVSVSSILDGVENADDMDSLNLKHCRATIIRPIPPLLSVKEL--CYGLC 174
           L D+      E+V VS I++G+++  D+            +RP+PP L V +L   YGLC
Sbjct: 67  LSDDGSGNLVETVDVSDIVEGLDDCTDVSDTFRGR-----LRPVPPKLDVAKLNLAYGLC 121

Query: 175 VDVCINNVWWEGVIFDSEDGCEERLIFLPELCDEQKFCIGQLRITQEW 318
           VDV  ++ WWEGV+FD E+G E+R +F P+L DE    +  LRITQ+W
Sbjct: 122 VDVFFSDAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDW 169


>ref|XP_002866281.1| hypothetical protein ARALYDRAFT_358079 [Arabidopsis lyrata subsp.
           lyrata] gi|297312116|gb|EFH42540.1| hypothetical protein
           ARALYDRAFT_358079 [Arabidopsis lyrata subsp. lyrata]
          Length = 1047

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/108 (39%), Positives = 62/108 (57%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   LDDNSCAKRTESVSVSSILDGVENADDMDSLNLKHCRATIIRPIPPLLSV--KELCYGLC 174
           L D+      E+V VS +++G+++  D+            +RP+PP L      L YGLC
Sbjct: 67  LSDDGTDSLVETVDVSDVVEGLDDCTDVSDTFRGR-----LRPVPPTLQFGKSNLAYGLC 121

Query: 175 VDVCINNVWWEGVIFDSEDGCEERLIFLPELCDEQKFCIGQLRITQEW 318
           VDV  +  WWEGV+FD E+G E+R +F P+L DE    +  LRITQ+W
Sbjct: 122 VDVFFSEAWWEGVLFDHENGSEKRRVFFPDLGDELDADLQSLRITQDW 169


>ref|XP_002278840.2| PREDICTED: uncharacterized protein LOC100243375 [Vitis vinifera]
          Length = 1332

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 49/108 (45%), Positives = 61/108 (56%), Gaps = 2/108 (1%)
 Frame = +1

Query: 1   LDDNSCAKRTESVSVSSILDGVENADDMDSLNLKHCRATIIRPIPPLLSVKE--LCYGLC 174
           LDD    +  ESVSVS  ++G  +  D D  N +      IRP+PP     +  L YGLC
Sbjct: 102 LDDRMGERFLESVSVSGAIEGT-SVVDTDQCNHRGR----IRPLPPQCDFGKWNLHYGLC 156

Query: 175 VDVCINNVWWEGVIFDSEDGCEERLIFLPELCDEQKFCIGQLRITQEW 318
           VDV     WWEGVIFD EDG E R +F P+L DE    +  +RITQ+W
Sbjct: 157 VDVFFREAWWEGVIFDHEDGLENRKVFFPDLGDELTVGVDNIRITQDW 204