BLASTX nr result
ID: Coptis21_contig00034607
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034607 (553 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002513045.1| conserved hypothetical protein [Ricinus comm... 132 5e-29 ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244... 123 2e-26 emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera] 123 2e-26 ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|2... 123 2e-26 ref|XP_002303932.1| predicted protein [Populus trichocarpa] gi|2... 119 3e-25 >ref|XP_002513045.1| conserved hypothetical protein [Ricinus communis] gi|223548056|gb|EEF49548.1| conserved hypothetical protein [Ricinus communis] Length = 361 Score = 132 bits (331), Expect = 5e-29 Identities = 61/106 (57%), Positives = 76/106 (71%), Gaps = 3/106 (2%) Frame = -3 Query: 311 GRATPXXXXXXXXXXXFATYNLITLVLHNRSSG---HDNSDSGLLSMLHDPITQMPERVK 141 GRA+P FATYNL+T+++HNRS G HD+SD G+ DP+ +MPE K Sbjct: 2 GRASPLLLILLVLGFFFATYNLVTMIMHNRSVGKRIHDDSDGGIF---FDPVIEMPEDAK 58 Query: 140 KQETVRFPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 3 K + R PFHVALTATD PY++WQCRIMYYWYK+ KD+PGSD+GGF Sbjct: 59 KSKNARMPFHVALTATDAPYSKWQCRIMYYWYKQKKDLPGSDLGGF 104 >ref|XP_002264860.1| PREDICTED: uncharacterized protein LOC100244671 [Vitis vinifera] Length = 362 Score = 123 bits (309), Expect = 2e-26 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 3/89 (3%) Frame = -3 Query: 260 ATYNLITLVLHNRSSGH---DNSDSGLLSMLHDPITQMPERVKKQETVRFPFHVALTATD 90 ATYNL+T+ +HNR++G D SD LLS DPI +MPE V+K + + PFH+ALTATD Sbjct: 19 ATYNLLTMTIHNRATGTLVVDESDHRLLS---DPIIEMPENVRKPKNAKLPFHIALTATD 75 Query: 89 GPYNQWQCRIMYYWYKKVKDMPGSDMGGF 3 PY++WQCRIMYYWYKK KD+PGS+MGGF Sbjct: 76 APYSKWQCRIMYYWYKKKKDLPGSEMGGF 104 >emb|CAN83338.1| hypothetical protein VITISV_011144 [Vitis vinifera] Length = 416 Score = 123 bits (309), Expect = 2e-26 Identities = 56/89 (62%), Positives = 70/89 (78%), Gaps = 3/89 (3%) Frame = -3 Query: 260 ATYNLITLVLHNRSSGH---DNSDSGLLSMLHDPITQMPERVKKQETVRFPFHVALTATD 90 ATYNL+T+ +HNR++G D SD LLS DPI +MPE V+K + + PFH+ALTATD Sbjct: 19 ATYNLLTMTIHNRATGTLVVDESDHRLLS---DPIIEMPENVRKPKNAKLPFHIALTATD 75 Query: 89 GPYNQWQCRIMYYWYKKVKDMPGSDMGGF 3 PY++WQCRIMYYWYKK KD+PGS+MGGF Sbjct: 76 APYSKWQCRIMYYWYKKKKDLPGSEMGGF 104 >ref|XP_002299202.1| predicted protein [Populus trichocarpa] gi|222846460|gb|EEE84007.1| predicted protein [Populus trichocarpa] Length = 362 Score = 123 bits (308), Expect = 2e-26 Identities = 59/106 (55%), Positives = 74/106 (69%), Gaps = 3/106 (2%) Frame = -3 Query: 311 GRATPXXXXXXXXXXXFATYNLITLVLHNRSSG---HDNSDSGLLSMLHDPITQMPERVK 141 GRA+ FATYNL+ +++H RS G HD+SD + DP+T+MPE VK Sbjct: 2 GRASLLVLILLTIGFFFATYNLVAMIMHYRSIGKWAHDDSDGQIFL---DPVTEMPEDVK 58 Query: 140 KQETVRFPFHVALTATDGPYNQWQCRIMYYWYKKVKDMPGSDMGGF 3 K + + PFHVALTATD PY++WQCRIMYYWYKK KD+PGS+MGGF Sbjct: 59 KAKNAKMPFHVALTATDAPYSKWQCRIMYYWYKKKKDLPGSEMGGF 104 >ref|XP_002303932.1| predicted protein [Populus trichocarpa] gi|222841364|gb|EEE78911.1| predicted protein [Populus trichocarpa] Length = 362 Score = 119 bits (298), Expect = 3e-25 Identities = 54/89 (60%), Positives = 67/89 (75%), Gaps = 3/89 (3%) Frame = -3 Query: 260 ATYNLITLVLHNRSSG---HDNSDSGLLSMLHDPITQMPERVKKQETVRFPFHVALTATD 90 ATYNL+T+ +HNRS G +D+SD DP+ +MPE VKK + R PFHVALTATD Sbjct: 19 ATYNLVTMTMHNRSIGKWVYDDSDG---EAFFDPVIEMPEEVKKPKNARMPFHVALTATD 75 Query: 89 GPYNQWQCRIMYYWYKKVKDMPGSDMGGF 3 PY++WQCRIMYYWYKK +D+ GS+MGGF Sbjct: 76 APYSKWQCRIMYYWYKKNRDLSGSEMGGF 104