BLASTX nr result

ID: Coptis21_contig00034574 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034574
         (641 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263808.1| PREDICTED: uncharacterized protein LOC100242...   173   3e-41
emb|CAN63862.1| hypothetical protein VITISV_015937 [Vitis vinifera]   172   4e-41
ref|XP_002533993.1| hypothetical protein RCOM_0274290 [Ricinus c...   152   7e-35
ref|XP_002304612.1| predicted protein [Populus trichocarpa] gi|2...   149   4e-34
ref|XP_003628970.1| hypothetical protein MTR_8g070690 [Medicago ...   131   1e-28

>ref|XP_002263808.1| PREDICTED: uncharacterized protein LOC100242840 [Vitis vinifera]
          Length = 386

 Score =  173 bits (438), Expect = 3e-41
 Identities = 104/196 (53%), Positives = 124/196 (63%), Gaps = 13/196 (6%)
 Frame = -3

Query: 549 KKWRTQ-----GHGTNSLARQYSSIVSPFTSQGSLLRKSKSCSEGRASIMSDEFDMW--S 391
           KKWR Q      H   S     S + S   SQ   LR+SKSC EGRA   SDEFD+W   
Sbjct: 135 KKWRNQCQASPRHVDGSPNHSNSPVASHRESQ---LRRSKSCGEGRACAPSDEFDLWLNG 191

Query: 390 INLNNSKHESAFSG----NYHGYDSNEANGKNIKESNSHEDDFKCGA-CLYLPGFSKGKP 226
            N++   H+  +SG       G       GK +   +  ED FKCGA CL+LPGF +GKP
Sbjct: 192 ANIDGGYHDRFYSGLATTQTEGSKDERKRGKKV---DPQEDGFKCGALCLFLPGFGRGKP 248

Query: 225 VRPRKEEGEEVANVISRTVSLEKFECGSWASSSM-SSNDEEKAGSVSLYFDLPLELIRNN 49
           VR RKEE E V NVISRTVSLEKFEC SWASS++ +SN EE   S++LYFDLPLELIR +
Sbjct: 249 VRARKEEAE-VTNVISRTVSLEKFECASWASSAIVNSNIEEDGDSMNLYFDLPLELIRTS 307

Query: 48  VNDAHSPAATAFVFER 1
           VNDA+SP A AFVF++
Sbjct: 308 VNDANSPVAAAFVFDK 323


>emb|CAN63862.1| hypothetical protein VITISV_015937 [Vitis vinifera]
          Length = 386

 Score =  172 bits (437), Expect = 4e-41
 Identities = 104/196 (53%), Positives = 124/196 (63%), Gaps = 13/196 (6%)
 Frame = -3

Query: 549 KKWRTQ-----GHGTNSLARQYSSIVSPFTSQGSLLRKSKSCSEGRASIMSDEFDMW--S 391
           KKWR Q      H   S     S + S   SQ   LR+SKSC EGRA   SDEFD+W   
Sbjct: 135 KKWRNQCQASXRHVDGSPNHSNSPVASHRESQ---LRRSKSCGEGRACAPSDEFDLWLNG 191

Query: 390 INLNNSKHESAFSG----NYHGYDSNEANGKNIKESNSHEDDFKCGA-CLYLPGFSKGKP 226
            N++   H+  +SG       G       GK +   +  ED FKCGA CL+LPGF +GKP
Sbjct: 192 ANIDGGYHDRFYSGLATTQTEGSKDERKXGKKV---DPQEDGFKCGALCLFLPGFGRGKP 248

Query: 225 VRPRKEEGEEVANVISRTVSLEKFECGSWASSSM-SSNDEEKAGSVSLYFDLPLELIRNN 49
           VR RKEE E V NVISRTVSLEKFEC SWASS++ +SN EE   S++LYFDLPLELIR +
Sbjct: 249 VRARKEEAE-VTNVISRTVSLEKFECASWASSAIVNSNIEEDGDSMNLYFDLPLELIRTS 307

Query: 48  VNDAHSPAATAFVFER 1
           VNDA+SP A AFVF++
Sbjct: 308 VNDANSPVAAAFVFDK 323


>ref|XP_002533993.1| hypothetical protein RCOM_0274290 [Ricinus communis]
           gi|223526013|gb|EEF28390.1| hypothetical protein
           RCOM_0274290 [Ricinus communis]
          Length = 355

 Score =  152 bits (383), Expect = 7e-35
 Identities = 91/196 (46%), Positives = 122/196 (62%), Gaps = 13/196 (6%)
 Frame = -3

Query: 549 KKWRTQGHGT----NSLARQYSSIVSPFTS--QGSLLRKSKSCSEGRASIMSDEFDMWSI 388
           KKW+ +   +      LA ++SS      +  +G+ LR+ +SC+EGR+S  ++  D+W  
Sbjct: 101 KKWKNESQASPRQIERLACRHSSANDSNLTLEEGTNLRRIRSCAEGRSSTPANGLDLWFS 160

Query: 387 NLNNSKHESAFSGNYHGYDSNE----ANGKNIKESNSHEDDFKCGA-CLYLPGFSKGKPV 223
             N  KHE+    +    DS +    A GK I+     +++FKCGA C+YLPGF KGKPV
Sbjct: 161 KPNTIKHETMQQESLKITDSKDEHYMAAGKKIEPK---DEEFKCGALCMYLPGFGKGKPV 217

Query: 222 RPRKE--EGEEVANVISRTVSLEKFECGSWASSSMSSNDEEKAGSVSLYFDLPLELIRNN 49
           + +KE     +V NVISRTVSLEKFECGSWASS+   ND E   S + YFDLPLELIR +
Sbjct: 218 KSKKEIQVHPDVGNVISRTVSLEKFECGSWASSAFM-NDHEDGDSTNHYFDLPLELIRTS 276

Query: 48  VNDAHSPAATAFVFER 1
            NDA SP A AFVF++
Sbjct: 277 ANDATSPVAAAFVFDK 292


>ref|XP_002304612.1| predicted protein [Populus trichocarpa] gi|222842044|gb|EEE79591.1|
           predicted protein [Populus trichocarpa]
          Length = 377

 Score =  149 bits (376), Expect = 4e-34
 Identities = 87/197 (44%), Positives = 127/197 (64%), Gaps = 9/197 (4%)
 Frame = -3

Query: 564 ILMNLKKWRTQGHGT----NSLARQYSSIVSPFTSQGSL-LRKSKSCSEGRASIMSDEFD 400
           + M  KKW+ +   +    ++LA ++S    P  +Q  + LR++KSC EGR +  +DE +
Sbjct: 123 LTMLKKKWKNESQASPRQIDNLAGRHSLAHPPLAAQQEIHLRRNKSCVEGRTAAPADELN 182

Query: 399 MWSINLNNSKHESAFSGNYHGYDSNEAN--GKNIKESNSHEDDFKCGA-CLYLPGFSKGK 229
            W    N SK ++   G++    S E +  G+N+   +  +D  KCG  C YLPGF+KGK
Sbjct: 183 FWFPRPNASKSDNRPHGHFKIEASKEDHITGENM---DPIDDGLKCGVLCFYLPGFAKGK 239

Query: 228 PVRPRKEEGE-EVANVISRTVSLEKFECGSWASSSMSSNDEEKAGSVSLYFDLPLELIRN 52
           PVRP+KEE   ++ NVISRTVS+EKFECGSWASS++ ++ E      +LYFDLPLELI+ 
Sbjct: 240 PVRPKKEEVRGDLGNVISRTVSVEKFECGSWASSAIINDHE--VDPKNLYFDLPLELIQA 297

Query: 51  NVNDAHSPAATAFVFER 1
           + NDA+SP A AF+F++
Sbjct: 298 SANDANSPVAAAFIFDK 314


>ref|XP_003628970.1| hypothetical protein MTR_8g070690 [Medicago truncatula]
           gi|355522992|gb|AET03446.1| hypothetical protein
           MTR_8g070690 [Medicago truncatula]
          Length = 317

 Score =  131 bits (329), Expect = 1e-28
 Identities = 82/163 (50%), Positives = 106/163 (65%), Gaps = 10/163 (6%)
 Frame = -3

Query: 459 LRKSKSCSEGRASIMS-DEFDMWSI-------NLNNSKHESAFSGNYHGYDSNEANGKNI 304
           LRKSKSC EGRAS+   DEFD W I       +  N KHES FS N      +  N  ++
Sbjct: 99  LRKSKSCGEGRASLSPFDEFDHWLIKPSMVEHDYTNIKHES-FSEN-EAIKEHHTNDSDL 156

Query: 303 KESNSHEDDFKCGA-CLYLPGFSKGKPVRPRKEEGEEVANVISRTVSLEKFECGSWASSS 127
            E+N+ E+ FKC   C++LPGF K K  + +KE G E+   ISRTVSLEKFECGSWASS+
Sbjct: 157 -ETNA-EEGFKCSVLCMFLPGFGKAKSAKTKKE-GSEMEGTISRTVSLEKFECGSWASSA 213

Query: 126 MSSNDEEKAGSVSLYFDLPLELIR-NNVNDAHSPAATAFVFER 1
           + ++ E    + S YFDLPLELI+ ++ ND H+P  +AFVFE+
Sbjct: 214 LFNDIE--TDNTSSYFDLPLELIKGSSYNDVHAPVTSAFVFEK 254


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