BLASTX nr result

ID: Coptis21_contig00034566 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034566
         (313 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|2...    65   4e-09
ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|2...    55   4e-06

>ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|222849573|gb|EEE87120.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = -2

Query: 174 MDLGCLDLGCITVLEKHKNDAAVFDLEKKDGDSEDSPTFSYSSKFGKNKVSKGTGLSA 1
           MDLGCLDLGCI+VL+KH +D+ V D   K+ DS +    S  SK GKNK  KGTG SA
Sbjct: 1   MDLGCLDLGCISVLDKHSSDSFVLDPVNKECDSREK--VSSGSKIGKNKSPKGTGQSA 56


>ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|222846022|gb|EEE83569.1|
           predicted protein [Populus trichocarpa]
          Length = 785

 Score = 55.5 bits (132), Expect = 4e-06
 Identities = 30/59 (50%), Positives = 37/59 (62%)
 Frame = -2

Query: 177 SMDLGCLDLGCITVLEKHKNDAAVFDLEKKDGDSEDSPTFSYSSKFGKNKVSKGTGLSA 1
           SMD+GCLDLGCI+VL+K+        L+  D + + S   S  SK GKNK  KGTG SA
Sbjct: 5   SMDVGCLDLGCISVLDKNSGHTV---LDSVDKECDSSEKVSSGSKPGKNKSPKGTGQSA 60


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