BLASTX nr result
ID: Coptis21_contig00034566
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034566 (313 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|2... 65 4e-09 ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|2... 55 4e-06 >ref|XP_002313165.1| predicted protein [Populus trichocarpa] gi|222849573|gb|EEE87120.1| predicted protein [Populus trichocarpa] Length = 756 Score = 65.5 bits (158), Expect = 4e-09 Identities = 34/58 (58%), Positives = 40/58 (68%) Frame = -2 Query: 174 MDLGCLDLGCITVLEKHKNDAAVFDLEKKDGDSEDSPTFSYSSKFGKNKVSKGTGLSA 1 MDLGCLDLGCI+VL+KH +D+ V D K+ DS + S SK GKNK KGTG SA Sbjct: 1 MDLGCLDLGCISVLDKHSSDSFVLDPVNKECDSREK--VSSGSKIGKNKSPKGTGQSA 56 >ref|XP_002298764.1| predicted protein [Populus trichocarpa] gi|222846022|gb|EEE83569.1| predicted protein [Populus trichocarpa] Length = 785 Score = 55.5 bits (132), Expect = 4e-06 Identities = 30/59 (50%), Positives = 37/59 (62%) Frame = -2 Query: 177 SMDLGCLDLGCITVLEKHKNDAAVFDLEKKDGDSEDSPTFSYSSKFGKNKVSKGTGLSA 1 SMD+GCLDLGCI+VL+K+ L+ D + + S S SK GKNK KGTG SA Sbjct: 5 SMDVGCLDLGCISVLDKNSGHTV---LDSVDKECDSSEKVSSGSKPGKNKSPKGTGQSA 60