BLASTX nr result
ID: Coptis21_contig00034564
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034564 (306 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002337931.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002323795.1| predicted protein [Populus trichocarpa] gi|2... 60 2e-07 ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus ... 57 2e-06 >ref|XP_002337931.1| predicted protein [Populus trichocarpa] gi|222870027|gb|EEF07158.1| predicted protein [Populus trichocarpa] Length = 120 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/47 (55%), Positives = 36/47 (76%) Frame = +2 Query: 2 HCSTIGDEGVEVFILNSKRLRQIQVEESKVTDTAKQWGSEKFIEMVT 142 HC IG E VE+F+LNS +LR +QVEE+KV+D A+ W S K I++V+ Sbjct: 74 HCDGIGAEAVELFVLNSPQLRGLQVEENKVSDVARSWASHKLIQIVS 120 >ref|XP_002323795.1| predicted protein [Populus trichocarpa] gi|222866797|gb|EEF03928.1| predicted protein [Populus trichocarpa] Length = 484 Score = 60.1 bits (144), Expect = 2e-07 Identities = 26/47 (55%), Positives = 36/47 (76%) Frame = +2 Query: 2 HCSTIGDEGVEVFILNSKRLRQIQVEESKVTDTAKQWGSEKFIEMVT 142 HC IG E VE+F+LNS +LR +QVEE+KV+D A+ W S K I++V+ Sbjct: 438 HCDGIGAEAVELFVLNSPQLRGLQVEENKVSDVARSWASHKLIQIVS 484 >ref|XP_002521466.1| F-box/LRR-repeat protein, putative [Ricinus communis] gi|223539365|gb|EEF40956.1| F-box/LRR-repeat protein, putative [Ricinus communis] Length = 484 Score = 56.6 bits (135), Expect = 2e-06 Identities = 25/46 (54%), Positives = 33/46 (71%) Frame = +2 Query: 2 HCSTIGDEGVEVFILNSKRLRQIQVEESKVTDTAKQWGSEKFIEMV 139 HC I E +E+F LNS RLR +QVEESK++D A++W FIE+V Sbjct: 438 HCCGIEAEAIELFFLNSPRLRCVQVEESKLSDVARKWAEHNFIEVV 483