BLASTX nr result

ID: Coptis21_contig00034542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034542
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25846.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBS...   141   5e-32
ref|XP_002284800.1| PREDICTED: CBS domain-containing protein CBS...   132   3e-29
ref|XP_002528574.1| conserved hypothetical protein [Ricinus comm...   132   4e-29
ref|XP_002317509.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>emb|CBI25846.3| unnamed protein product [Vitis vinifera]
          Length = 131

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/107 (60%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
 Frame = +1

Query: 118 MAVTLSSYEVSDLCLGKPPLKSLSITSTLSDALHTLKRSHENYLSVWTCNHSSK--KELM 291
           MAV+L  +EVSDLCLGKP L+SL +++T++DAL  LKRS + YLSVW+C+H+SK  K  +
Sbjct: 1   MAVSLLGHEVSDLCLGKPALRSLPVSATVADALAALKRSGDAYLSVWSCDHTSKINKSHL 60

Query: 292 NECQCVGKICMVDIVCYLCNEENIASPSTALGNPVSVLLPKVDGLVR 432
            +C+C+GKICMVD+VC+LC E+N++ PS AL +P+S+LLPKV GLVR
Sbjct: 61  EDCRCIGKICMVDVVCFLCREDNLSCPSDALQSPLSLLLPKVPGLVR 107


>ref|XP_002269338.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
          Length = 384

 Score =  141 bits (356), Expect = 5e-32
 Identities = 65/107 (60%), Positives = 89/107 (83%), Gaps = 2/107 (1%)
 Frame = +1

Query: 118 MAVTLSSYEVSDLCLGKPPLKSLSITSTLSDALHTLKRSHENYLSVWTCNHSSK--KELM 291
           MAV+L  +EVSDLCLGKP L+SL +++T++DAL  LKRS + YLSVW+C+H+SK  K  +
Sbjct: 1   MAVSLLGHEVSDLCLGKPALRSLPVSATVADALAALKRSGDAYLSVWSCDHTSKINKSHL 60

Query: 292 NECQCVGKICMVDIVCYLCNEENIASPSTALGNPVSVLLPKVDGLVR 432
            +C+C+GKICMVD+VC+LC E+N++ PS AL +P+S+LLPKV GLVR
Sbjct: 61  EDCRCIGKICMVDVVCFLCREDNLSCPSDALQSPLSLLLPKVPGLVR 107


>ref|XP_002284800.1| PREDICTED: CBS domain-containing protein CBSX5 [Vitis vinifera]
           gi|302143038|emb|CBI20333.3| unnamed protein product
           [Vitis vinifera]
          Length = 394

 Score =  132 bits (332), Expect = 3e-29
 Identities = 60/104 (57%), Positives = 85/104 (81%)
 Frame = +1

Query: 118 MAVTLSSYEVSDLCLGKPPLKSLSITSTLSDALHTLKRSHENYLSVWTCNHSSKKELMNE 297
           MA +L ++ VSDLCLGKP L+SLSI++T+ +AL  LK S ++++SVW+C+HS+   + +E
Sbjct: 1   MAFSLLAHVVSDLCLGKPALRSLSISATVGEALSALKTSEDSFISVWSCDHSAN--IQDE 58

Query: 298 CQCVGKICMVDIVCYLCNEENIASPSTALGNPVSVLLPKVDGLV 429
           C+CVGKICMVD+VCYLC ++N+ SPS+AL +PVS LLP + GLV
Sbjct: 59  CRCVGKICMVDVVCYLCKDDNLLSPSSALKSPVSDLLPNIPGLV 102


>ref|XP_002528574.1| conserved hypothetical protein [Ricinus communis]
           gi|223532018|gb|EEF33829.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 408

 Score =  132 bits (331), Expect = 4e-29
 Identities = 61/112 (54%), Positives = 87/112 (77%), Gaps = 8/112 (7%)
 Frame = +1

Query: 118 MAVTLSSYEVSDLCLGKPPLKSLSITSTLSDALHTLKRSHENYLSVWTCNHSSKK----- 282
           MAV+L ++EVSDLCLGKP L+SL +T+T+++AL  LK S +++LSVW C+H +K+     
Sbjct: 1   MAVSLFAHEVSDLCLGKPALRSLPVTATVAEALSALKNSDDSFLSVWNCDHITKRNSGFN 60

Query: 283 ---ELMNECQCVGKICMVDIVCYLCNEENIASPSTALGNPVSVLLPKVDGLV 429
              E  +EC+CVGK+ +VD++CYLC ++N+ SPS AL +PVSVLLPK+ GLV
Sbjct: 61  CDREDRDECKCVGKVSIVDVICYLCQDKNLVSPSDALKDPVSVLLPKIPGLV 112


>ref|XP_002317509.1| predicted protein [Populus trichocarpa] gi|222860574|gb|EEE98121.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/116 (51%), Positives = 84/116 (72%), Gaps = 12/116 (10%)
 Frame = +1

Query: 118 MAVTLSSYEVSDLCLGKPPLKSLSITSTLSDALHTLKRSHENYLSVWTCNHSSKKEL--- 288
           MAV+L + E+SDLCLGKP L+SLS+T+T+++ L  LK S +N+LSVW+C H++K      
Sbjct: 1   MAVSLLAREISDLCLGKPALRSLSLTTTITEVLFALKNSDDNFLSVWSCEHTAKTNKDYR 60

Query: 289 ---------MNECQCVGKICMVDIVCYLCNEENIASPSTALGNPVSVLLPKVDGLV 429
                    + EC+CVGK+ MVD++CYLC +EN+ SPS AL  PVSVLLP++ G+V
Sbjct: 61  GNCEEDGCDVGECKCVGKVSMVDVICYLCKDENLLSPSDALKAPVSVLLPEIPGMV 116


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