BLASTX nr result
ID: Coptis21_contig00034524
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034524 (616 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion chann... 141 8e-32 ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putativ... 130 1e-28 ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|2... 120 2e-25 ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion chann... 119 4e-25 ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion chann... 115 5e-24 >ref|XP_003634689.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Vitis vinifera] Length = 667 Score = 141 bits (356), Expect = 8e-32 Identities = 71/131 (54%), Positives = 83/131 (63%), Gaps = 3/131 (2%) Frame = +1 Query: 190 EEEESSYECH---PLYTICRAQRRNWFLGKVLDPRTKWIQEWNRXXXXXXXXXXXXDPLF 360 EEE+ EC PLY C + + L +VLDPR KW+QEWNR DPLF Sbjct: 26 EEEDEEEECRDREPLYGRCSSGLKPKCLSRVLDPRAKWVQEWNRVFLLVCATGLFVDPLF 85 Query: 361 FYSLSISEACMCLFIDGWFAITVTVLRCMTDALHVLNMLLQFKMLKFASLMKREEEEKLH 540 FY LSI+ CMCLF+DGWFAITVT LRCMTDALH+ NM LQ KM K + EE +LH Sbjct: 86 FYVLSINSTCMCLFVDGWFAITVTALRCMTDALHLWNMWLQLKMAKRTFHVVGEEGSRLH 145 Query: 541 NTSAKAVAIRY 573 + SA VA+RY Sbjct: 146 DASASTVALRY 156 >ref|XP_002525760.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis] gi|223534910|gb|EEF36596.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis] Length = 687 Score = 130 bits (328), Expect = 1e-28 Identities = 63/111 (56%), Positives = 74/111 (66%), Gaps = 5/111 (4%) Frame = +1 Query: 193 EEESSYECHPLYTICRA-----QRRNWFLGKVLDPRTKWIQEWNRXXXXXXXXXXXXDPL 357 EEES+ +C +C A + W LG+VLDPR KW+QEWNR DPL Sbjct: 40 EEESTRDCRNTLFMCGAGLVPKRSGGWSLGQVLDPRAKWVQEWNRGFLLVCATGLFVDPL 99 Query: 358 FFYSLSISEACMCLFIDGWFAITVTVLRCMTDALHVLNMLLQFKMLKFASL 510 FFY+LS+S+ CMCLFIDGWFA+TVT LRCMTDALHV NM LQ KM K S+ Sbjct: 100 FFYALSVSDTCMCLFIDGWFALTVTALRCMTDALHVWNMWLQLKMAKKPSI 150 >ref|XP_002330420.1| predicted protein [Populus trichocarpa] gi|222871805|gb|EEF08936.1| predicted protein [Populus trichocarpa] Length = 635 Score = 120 bits (301), Expect = 2e-25 Identities = 54/86 (62%), Positives = 63/86 (73%) Frame = +1 Query: 241 AQRRNWFLGKVLDPRTKWIQEWNRXXXXXXXXXXXXDPLFFYSLSISEACMCLFIDGWFA 420 ++RR W LG+VLDPR KW+QEWNR DPLFFY LSIS+ CMCLF+DGWFA Sbjct: 10 SKRRGWSLGQVLDPRGKWVQEWNRVFLLVCATGLFVDPLFFYVLSISDTCMCLFVDGWFA 69 Query: 421 ITVTVLRCMTDALHVLNMLLQFKMLK 498 ITVT LRCMTD L++ NM LQ K+ K Sbjct: 70 ITVTALRCMTDVLYLWNMWLQLKIAK 95 >ref|XP_003526201.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max] Length = 691 Score = 119 bits (298), Expect = 4e-25 Identities = 54/103 (52%), Positives = 70/103 (67%) Frame = +1 Query: 262 LGKVLDPRTKWIQEWNRXXXXXXXXXXXXDPLFFYSLSISEACMCLFIDGWFAITVTVLR 441 LG+VLDPR KW+QEWNR DPLFFY+LS+S++CMC+F+DGW A+TVTVLR Sbjct: 66 LGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSVSDSCMCVFVDGWLAVTVTVLR 125 Query: 442 CMTDALHVLNMLLQFKMLKFASLMKREEEEKLHNTSAKAVAIR 570 CMTDALHV NM+++ KM K + TS+ +V +R Sbjct: 126 CMTDALHVWNMVIRCKMAKRTFGLGASTTSSGRGTSSSSVGLR 168 >ref|XP_003541002.1| PREDICTED: cyclic nucleotide-gated ion channel 4-like [Glycine max] Length = 690 Score = 115 bits (289), Expect = 5e-24 Identities = 50/79 (63%), Positives = 61/79 (77%) Frame = +1 Query: 262 LGKVLDPRTKWIQEWNRXXXXXXXXXXXXDPLFFYSLSISEACMCLFIDGWFAITVTVLR 441 LG+VLDPR KW+QEWNR DPLFFY LS+S++CMC+F+DGW A+TVTVLR Sbjct: 67 LGRVLDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYVLSVSDSCMCVFVDGWLAVTVTVLR 126 Query: 442 CMTDALHVLNMLLQFKMLK 498 CMTDALHV NM+++ KM K Sbjct: 127 CMTDALHVWNMVIRSKMAK 145