BLASTX nr result
ID: Coptis21_contig00034519
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034519 (349 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002519035.1| conserved hypothetical protein [Ricinus comm... 167 6e-40 emb|CBI14793.3| unnamed protein product [Vitis vinifera] 164 7e-39 ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793... 164 9e-39 ref|NP_001190676.1| sensitive to freezing 6 protein [Arabidopsis... 164 9e-39 ref|NP_192401.5| sensitive to freezing 6 protein [Arabidopsis th... 164 9e-39 >ref|XP_002519035.1| conserved hypothetical protein [Ricinus communis] gi|223541698|gb|EEF43246.1| conserved hypothetical protein [Ricinus communis] Length = 1255 Score = 167 bits (424), Expect = 6e-40 Identities = 79/106 (74%), Positives = 88/106 (83%) Frame = +1 Query: 31 SSNFPSLANSKSTFEEFFFSQRPQTSAWWPNFLCVCSVFSSGCVQLHWAEWPLSHSGSAS 210 SS S NSKSTFEE F SQ+ QTSA WPNFLCVCSVFSSG VQLHW++WP S + + Sbjct: 227 SSKSSSSTNSKSTFEEKFLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPSRTNATP 286 Query: 211 KWFSTCKGLLGAGPSGIMAADAIITEAGTMHVAGVPIVNPSTVVVW 348 +WF T KGLLGAGPSGIMAADAI+T++G MHVAGVPIVNPSTVVVW Sbjct: 287 EWFCTSKGLLGAGPSGIMAADAIVTDSGAMHVAGVPIVNPSTVVVW 332 >emb|CBI14793.3| unnamed protein product [Vitis vinifera] Length = 513 Score = 164 bits (415), Expect = 7e-39 Identities = 79/106 (74%), Positives = 87/106 (82%) Frame = +1 Query: 31 SSNFPSLANSKSTFEEFFFSQRPQTSAWWPNFLCVCSVFSSGCVQLHWAEWPLSHSGSAS 210 SS S + KS FEE F SQ+PQTS WPNFLCVCSVFSSG +QLHW++WP +G+ S Sbjct: 217 SSKTSSSTSLKSPFEEKFLSQQPQTSDRWPNFLCVCSVFSSGSIQLHWSQWP-PQNGATS 275 Query: 211 KWFSTCKGLLGAGPSGIMAADAIITEAGTMHVAGVPIVNPSTVVVW 348 KWFST KGLLGAGPSGIMAADAIIT+ G MHVAGVPIVNPSTVVVW Sbjct: 276 KWFSTAKGLLGAGPSGIMAADAIITDTGAMHVAGVPIVNPSTVVVW 321 >ref|XP_003541539.1| PREDICTED: uncharacterized protein LOC100793949 [Glycine max] Length = 1244 Score = 164 bits (414), Expect = 9e-39 Identities = 76/106 (71%), Positives = 87/106 (82%) Frame = +1 Query: 31 SSNFPSLANSKSTFEEFFFSQRPQTSAWWPNFLCVCSVFSSGCVQLHWAEWPLSHSGSAS 210 SS + ANSK TFEE + SQ+ QTSA WPNFLCVCSVFSSG VQLHW++WP + +G+ Sbjct: 228 SSKSSAPANSKLTFEEKYLSQQSQTSARWPNFLCVCSVFSSGSVQLHWSQWPPTQNGTTP 287 Query: 211 KWFSTCKGLLGAGPSGIMAADAIITEAGTMHVAGVPIVNPSTVVVW 348 KWF T KGLLG GPSGIMA DAIIT++G MHVAGVPIVNPST+VVW Sbjct: 288 KWFCTSKGLLGCGPSGIMAGDAIITDSGAMHVAGVPIVNPSTIVVW 333 >ref|NP_001190676.1| sensitive to freezing 6 protein [Arabidopsis thaliana] gi|332657042|gb|AEE82442.1| sensitive to freezing 6 protein [Arabidopsis thaliana] Length = 1267 Score = 164 bits (414), Expect = 9e-39 Identities = 77/106 (72%), Positives = 88/106 (83%) Frame = +1 Query: 31 SSNFPSLANSKSTFEEFFFSQRPQTSAWWPNFLCVCSVFSSGCVQLHWAEWPLSHSGSAS 210 SS S N+KSTFEE F SQ ++SA WPNFLCVCSVFSSG VQ+HW++WP + +A Sbjct: 242 SSKPSSGTNAKSTFEEKFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAP 301 Query: 211 KWFSTCKGLLGAGPSGIMAADAIITEAGTMHVAGVPIVNPSTVVVW 348 KWFST KGLLGAGPSGIMAADAIIT++G MHVAGVPIVNPST+VVW Sbjct: 302 KWFSTKKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVW 347 >ref|NP_192401.5| sensitive to freezing 6 protein [Arabidopsis thaliana] gi|395406812|sp|F4JGZ1.1|MED16_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit 16; AltName: Full=Protein SENSITIVE TO FREEZING 6 gi|332657041|gb|AEE82441.1| sensitive to freezing 6 protein [Arabidopsis thaliana] Length = 1278 Score = 164 bits (414), Expect = 9e-39 Identities = 77/106 (72%), Positives = 88/106 (83%) Frame = +1 Query: 31 SSNFPSLANSKSTFEEFFFSQRPQTSAWWPNFLCVCSVFSSGCVQLHWAEWPLSHSGSAS 210 SS S N+KSTFEE F SQ ++SA WPNFLCVCSVFSSG VQ+HW++WP + +A Sbjct: 242 SSKPSSGTNAKSTFEEKFLSQSSESSARWPNFLCVCSVFSSGSVQIHWSQWPSNQGSTAP 301 Query: 211 KWFSTCKGLLGAGPSGIMAADAIITEAGTMHVAGVPIVNPSTVVVW 348 KWFST KGLLGAGPSGIMAADAIIT++G MHVAGVPIVNPST+VVW Sbjct: 302 KWFSTKKGLLGAGPSGIMAADAIITDSGAMHVAGVPIVNPSTIVVW 347