BLASTX nr result
ID: Coptis21_contig00034413
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis21_contig00034413 (326 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259... 76 2e-12 emb|CBI30220.3| unnamed protein product [Vitis vinifera] 76 2e-12 ref|XP_002528638.1| conserved hypothetical protein [Ricinus comm... 72 6e-11 ref|XP_004172887.1| PREDICTED: uncharacterized LOC101222223 [Cuc... 66 3e-09 ref|XP_004138003.1| PREDICTED: uncharacterized protein LOC101222... 66 3e-09 >ref|XP_002277851.2| PREDICTED: uncharacterized protein LOC100259589 [Vitis vinifera] Length = 470 Score = 76.3 bits (186), Expect = 2e-12 Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 5/74 (6%) Frame = -3 Query: 252 VSYTSPD----TQSQQSNKQNTYSHPNKAKQQ-QLSDEDEAGYNVEDGGVDGKKKTSLWH 88 V++ PD +QSQQ K Y + KAKQQ LSDEDE G +D DGK+K S WH Sbjct: 31 VAFAHPDPDHHSQSQQPVKHG-YPYVTKAKQQLTLSDEDEPGLTGDDSTADGKRKVSPWH 89 Query: 87 RMKWTDNMVRLLIM 46 RMKWTDNMVRLLIM Sbjct: 90 RMKWTDNMVRLLIM 103 >emb|CBI30220.3| unnamed protein product [Vitis vinifera] Length = 410 Score = 76.3 bits (186), Expect = 2e-12 Identities = 43/74 (58%), Positives = 49/74 (66%), Gaps = 5/74 (6%) Frame = -3 Query: 252 VSYTSPD----TQSQQSNKQNTYSHPNKAKQQ-QLSDEDEAGYNVEDGGVDGKKKTSLWH 88 V++ PD +QSQQ K Y + KAKQQ LSDEDE G +D DGK+K S WH Sbjct: 36 VAFAHPDPDHHSQSQQPVKHG-YPYVTKAKQQLTLSDEDEPGLTGDDSTADGKRKVSPWH 94 Query: 87 RMKWTDNMVRLLIM 46 RMKWTDNMVRLLIM Sbjct: 95 RMKWTDNMVRLLIM 108 >ref|XP_002528638.1| conserved hypothetical protein [Ricinus communis] gi|223531927|gb|EEF33741.1| conserved hypothetical protein [Ricinus communis] Length = 499 Score = 71.6 bits (174), Expect = 6e-11 Identities = 38/63 (60%), Positives = 42/63 (66%), Gaps = 2/63 (3%) Frame = -3 Query: 228 QSQQSNKQ--NTYSHPNKAKQQQLSDEDEAGYNVEDGGVDGKKKTSLWHRMKWTDNMVRL 55 QSQQS K N YS N Q LSDEDE G+ +D DGK+K S W RMKWTD+MVRL Sbjct: 64 QSQQSVKHAYNPYSSLNPKPQSPLSDEDEPGFTGDDSTGDGKRKVSPWQRMKWTDSMVRL 123 Query: 54 LIM 46 LIM Sbjct: 124 LIM 126 >ref|XP_004172887.1| PREDICTED: uncharacterized LOC101222223 [Cucumis sativus] Length = 439 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/72 (51%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Frame = -3 Query: 252 VSYTSPDTQSQQSNKQNT--YSHPNKAKQQQ--LSDEDEAGYNVEDGGVDGKKKTSLWHR 85 VSY D Q + Y P KAK QQ LSD++E G+ +D DGKKK S W R Sbjct: 35 VSYVQHDPHHHQQPPSVSVKYPFPTKAKPQQSNLSDDEEQGFAADDSNGDGKKKISPWQR 94 Query: 84 MKWTDNMVRLLI 49 MKWTD MVRLLI Sbjct: 95 MKWTDMMVRLLI 106 >ref|XP_004138003.1| PREDICTED: uncharacterized protein LOC101222223 [Cucumis sativus] Length = 468 Score = 65.9 bits (159), Expect = 3e-09 Identities = 37/72 (51%), Positives = 42/72 (58%), Gaps = 4/72 (5%) Frame = -3 Query: 252 VSYTSPDTQSQQSNKQNT--YSHPNKAKQQQ--LSDEDEAGYNVEDGGVDGKKKTSLWHR 85 VSY D Q + Y P KAK QQ LSD++E G+ +D DGKKK S W R Sbjct: 64 VSYVQHDPHHHQQPPSVSVKYPFPTKAKPQQSNLSDDEEQGFAADDSNGDGKKKISPWQR 123 Query: 84 MKWTDNMVRLLI 49 MKWTD MVRLLI Sbjct: 124 MKWTDMMVRLLI 135