BLASTX nr result

ID: Coptis21_contig00034111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034111
         (566 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   255   3e-66
ref|XP_002321011.1| multidrug resistance protein ABC transporter...   252   3e-65
ref|XP_002301476.1| multidrug resistance protein ABC transporter...   249   2e-64
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   248   4e-64
ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata] gi...   246   1e-63

>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
           gi|223537625|gb|EEF39248.1| multidrug
           resistance-associated protein 2, 6 (mrp2, 6),
           abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  255 bits (652), Expect = 3e-66
 Identities = 119/188 (63%), Positives = 157/188 (83%)
 Frame = -2

Query: 565 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 386
           +GMLIRS LIT+LY+KGL LS S+RQ+HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 392 LGMLIRSTLITSLYRKGLRLSCSARQSHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 451

Query: 385 ILVALGLLYIYIGVSALSALLAIFVIMVFVMLNTGRNNKYQYNLMKMKDSRMKATSEMLN 206
           + VAL LLY  +GVS ++AL+ I  +MVF +  T RNN++Q NLM  +DSRMKAT+EMLN
Sbjct: 452 VTVALVLLYNALGVSVIAALIGIACVMVFALYGTRRNNRFQKNLMMNRDSRMKATNEMLN 511

Query: 205 NMRVIKFQAWEEHFYKRVQEFRDAEYNWLSKFMFTNSASVVLLWSTPVIVTTLSFGTMIW 26
            MRVIKFQAWEEHF KR+Q FR++E+ WLSKFM++ S +++++W TP++++T++FGT + 
Sbjct: 512 YMRVIKFQAWEEHFNKRIQNFRESEFEWLSKFMYSVSGNIIVMWCTPLLISTVTFGTALL 571

Query: 25  LGFPLDSG 2
            G PLD+G
Sbjct: 572 FGVPLDAG 579


>ref|XP_002321011.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222861784|gb|EEE99326.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1507

 Score =  252 bits (643), Expect = 3e-65
 Identities = 118/188 (62%), Positives = 157/188 (83%)
 Frame = -2

Query: 565 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 386
           +GMLIR  LIT+LYKKGL LS S+RQAHG+GQIVNYMAVDAQQLSDM+LQLH++WLMP Q
Sbjct: 393 LGMLIRCTLITSLYKKGLMLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHSIWLMPLQ 452

Query: 385 ILVALGLLYIYIGVSALSALLAIFVIMVFVMLNTGRNNKYQYNLMKMKDSRMKATSEMLN 206
           + V L LLY  +G SA++AL+    ++VF + +  RNNK+Q N+M  +DSRMKAT+EMLN
Sbjct: 453 VGVGLALLYNALGTSAVTALIGTLGVIVFAVFSNKRNNKFQRNVMINRDSRMKATNEMLN 512

Query: 205 NMRVIKFQAWEEHFYKRVQEFRDAEYNWLSKFMFTNSASVVLLWSTPVIVTTLSFGTMIW 26
            MRVIKFQAWE+HF KR+Q+FRD+E+ W+SKF+++ S + +++WSTP++V+TL+FGT + 
Sbjct: 513 YMRVIKFQAWEDHFNKRIQDFRDSEFGWISKFLYSISINTIVMWSTPLLVSTLTFGTALL 572

Query: 25  LGFPLDSG 2
           LG PLD+G
Sbjct: 573 LGVPLDAG 580


>ref|XP_002301476.1| multidrug resistance protein ABC transporter family [Populus
           trichocarpa] gi|222843202|gb|EEE80749.1| multidrug
           resistance protein ABC transporter family [Populus
           trichocarpa]
          Length = 1508

 Score =  249 bits (637), Expect = 2e-64
 Identities = 116/188 (61%), Positives = 156/188 (82%)
 Frame = -2

Query: 565 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 386
           +GMLIR +LIT+LYKKGL LS S+RQAHG+GQIVNYMAVDAQQLSDM+LQLH++WLMP Q
Sbjct: 394 LGMLIRCSLITSLYKKGLRLSCSARQAHGVGQIVNYMAVDAQQLSDMMLQLHSIWLMPLQ 453

Query: 385 ILVALGLLYIYIGVSALSALLAIFVIMVFVMLNTGRNNKYQYNLMKMKDSRMKATSEMLN 206
           + V L LLY  +G S ++A L I  +++F +  T RNN++Q N+M  +DSRMKAT+EMLN
Sbjct: 454 LGVGLVLLYNVLGASTITAFLGILSVILFAIFGTKRNNRFQRNVMVNRDSRMKATNEMLN 513

Query: 205 NMRVIKFQAWEEHFYKRVQEFRDAEYNWLSKFMFTNSASVVLLWSTPVIVTTLSFGTMIW 26
            MRVIKFQAWEEHF KR+Q FR++E+ W+SKF+++ S +++++WS P++V+TL+FGT + 
Sbjct: 514 YMRVIKFQAWEEHFNKRIQNFRESEFGWISKFLYSISGNIIVMWSAPLLVSTLTFGTALL 573

Query: 25  LGFPLDSG 2
           LG PLD+G
Sbjct: 574 LGVPLDAG 581


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  248 bits (634), Expect = 4e-64
 Identities = 114/188 (60%), Positives = 157/188 (83%)
 Frame = -2

Query: 565 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 386
           +GMLIRS LIT+LY+KGL LS S+RQ HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 394 LGMLIRSTLITSLYRKGLRLSCSARQDHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 453

Query: 385 ILVALGLLYIYIGVSALSALLAIFVIMVFVMLNTGRNNKYQYNLMKMKDSRMKATSEMLN 206
           + VAL LLY  +G + ++A++ IF +++FV++ T RNN++Q+N+MK +D RMKAT+EMLN
Sbjct: 454 VTVALVLLYNELGGAMITAVIGIFAVLLFVLMGTRRNNRFQHNVMKNRDLRMKATNEMLN 513

Query: 205 NMRVIKFQAWEEHFYKRVQEFRDAEYNWLSKFMFTNSASVVLLWSTPVIVTTLSFGTMIW 26
            MRVIKFQAWEEHF KR+Q FR++E+ WL+KFM++ S +++++WSTP++++  +F T I 
Sbjct: 514 YMRVIKFQAWEEHFNKRIQSFRESEFGWLTKFMYSISGNIIVMWSTPLMISAFTFATAIM 573

Query: 25  LGFPLDSG 2
           LG  LD+G
Sbjct: 574 LGVQLDAG 581


>ref|XP_002880324.1| ATMRP4 [Arabidopsis lyrata subsp. lyrata]
           gi|297326163|gb|EFH56583.1| ATMRP4 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1525

 Score =  246 bits (629), Expect = 1e-63
 Identities = 117/188 (62%), Positives = 154/188 (81%)
 Frame = -2

Query: 565 VGMLIRSALITALYKKGLTLSSSSRQAHGLGQIVNYMAVDAQQLSDMVLQLHNLWLMPCQ 386
           +GMLIRS LITALYKKGL L+ S+RQ HG+GQIVNYMAVDAQQLSDM+LQLH +WLMP Q
Sbjct: 398 LGMLIRSTLITALYKKGLKLTGSARQNHGVGQIVNYMAVDAQQLSDMMLQLHAIWLMPLQ 457

Query: 385 ILVALGLLYIYIGVSALSALLAIFVIMVFVMLNTGRNNKYQYNLMKMKDSRMKATSEMLN 206
           + VAL LLY  +G S ++A++ +  + VF++L T RNN YQ++LM  +DSRMKAT+EMLN
Sbjct: 458 VTVALVLLYGSLGASVITAVIGLTGVFVFILLGTQRNNGYQFSLMGNRDSRMKATNEMLN 517

Query: 205 NMRVIKFQAWEEHFYKRVQEFRDAEYNWLSKFMFTNSASVVLLWSTPVIVTTLSFGTMIW 26
            MRVIKFQAWE HF KR+ +FRD E+ WLSKF+++ +A++++LWSTPV+++ L+F T + 
Sbjct: 518 YMRVIKFQAWENHFNKRILKFRDMEFGWLSKFLYSIAANIIVLWSTPVLISALTFATALA 577

Query: 25  LGFPLDSG 2
           LG  LD+G
Sbjct: 578 LGVKLDAG 585


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