BLASTX nr result

ID: Coptis21_contig00034080 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00034080
         (470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300362.1| multidrug resistance protein ABC transporter...   269   2e-70
ref|XP_002303920.1| multidrug resistance protein ABC transporter...   269   2e-70
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   265   3e-69
emb|CBI26749.3| unnamed protein product [Vitis vinifera]              265   3e-69
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]   265   3e-69

>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1488

 Score =  269 bits (688), Expect = 2e-70
 Identities = 128/156 (82%), Positives = 142/156 (91%)
 Frame = -1

Query: 470  PLVIEAHRPDHNWPSHGDVAIHNLQVRYAPHMPLILQGLTCTFPGGKKSGIVGRTGSGKS 291
            PL+IEA RP+ +WPSHG+V I+NLQVRYAPHMPL+L+GLTCTFPGG K+GIVGRTGSGKS
Sbjct: 1222 PLIIEASRPNRSWPSHGEVEINNLQVRYAPHMPLVLRGLTCTFPGGMKTGIVGRTGSGKS 1281

Query: 290  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRHKLSIIPQDPTMFEGTVRSNLDPLEEY 111
            TLIQTLFR+VEP AG+I+ID  DISLIGLHDLR +LSIIPQDPTMFEGTVRSNLDPLEEY
Sbjct: 1282 TLIQTLFRIVEPAAGRIMIDDIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1341

Query: 110  KDEEIWEALDKCQLGDEVRKKEWKLDSLVTADGEIW 3
             DE+IWEALDKCQLGDEVRKKE KLDS V  +GE W
Sbjct: 1342 TDEQIWEALDKCQLGDEVRKKERKLDSTVIENGENW 1377


>ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222841352|gb|EEE78899.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1305

 Score =  269 bits (688), Expect = 2e-70
 Identities = 128/156 (82%), Positives = 140/156 (89%)
 Frame = -1

Query: 470  PLVIEAHRPDHNWPSHGDVAIHNLQVRYAPHMPLILQGLTCTFPGGKKSGIVGRTGSGKS 291
            PLVIEA+RP H+WPSHG++ I NLQVRYAPHMPL+L+GL+CTFPGGKK+GIVGRTGSGKS
Sbjct: 1036 PLVIEANRPGHSWPSHGEIDIDNLQVRYAPHMPLVLRGLSCTFPGGKKTGIVGRTGSGKS 1095

Query: 290  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRHKLSIIPQDPTMFEGTVRSNLDPLEEY 111
            TLIQ LFR VEP AGQI+ID  DISLIGLHDLR +LSIIPQDPTMFEGTVRSNLDPLEEY
Sbjct: 1096 TLIQALFRTVEPAAGQIMIDSIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1155

Query: 110  KDEEIWEALDKCQLGDEVRKKEWKLDSLVTADGEIW 3
             DE+IWE LDKCQLGDEVRKKE KLDS V  +GE W
Sbjct: 1156 TDEQIWEVLDKCQLGDEVRKKERKLDSTVIENGENW 1191


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  265 bits (677), Expect = 3e-69
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -1

Query: 470  PLVIEAHRPDHNWPSHGDVAIHNLQVRYAPHMPLILQGLTCTFPGGKKSGIVGRTGSGKS 291
            PLV+E ++P  +WPSHG+V I +LQVRYAPH+PL+L+GLTC FPGG K+GIVGRTGSGKS
Sbjct: 1224 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1283

Query: 290  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRHKLSIIPQDPTMFEGTVRSNLDPLEEY 111
            TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSIIPQDPTMFEGTVRSNLDPLEEY
Sbjct: 1284 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1343

Query: 110  KDEEIWEALDKCQLGDEVRKKEWKLDSLVTADGEIW 3
             DE+IWEALDKCQLGDEVRKKE KLDS V  +GE W
Sbjct: 1344 SDEQIWEALDKCQLGDEVRKKEGKLDSAVNENGENW 1379


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score =  265 bits (677), Expect = 3e-69
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -1

Query: 470  PLVIEAHRPDHNWPSHGDVAIHNLQVRYAPHMPLILQGLTCTFPGGKKSGIVGRTGSGKS 291
            PLV+E ++P  +WPSHG+V I +LQVRYAPH+PL+L+GLTC FPGG K+GIVGRTGSGKS
Sbjct: 1008 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1067

Query: 290  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRHKLSIIPQDPTMFEGTVRSNLDPLEEY 111
            TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSIIPQDPTMFEGTVRSNLDPLEEY
Sbjct: 1068 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1127

Query: 110  KDEEIWEALDKCQLGDEVRKKEWKLDSLVTADGEIW 3
             DE+IWEALDKCQLGDEVRKKE KLDS V  +GE W
Sbjct: 1128 SDEQIWEALDKCQLGDEVRKKEGKLDSAVNENGENW 1163


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score =  265 bits (677), Expect = 3e-69
 Identities = 125/156 (80%), Positives = 142/156 (91%)
 Frame = -1

Query: 470  PLVIEAHRPDHNWPSHGDVAIHNLQVRYAPHMPLILQGLTCTFPGGKKSGIVGRTGSGKS 291
            PLV+E ++P  +WPSHG+V I +LQVRYAPH+PL+L+GLTC FPGG K+GIVGRTGSGKS
Sbjct: 1197 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1256

Query: 290  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRHKLSIIPQDPTMFEGTVRSNLDPLEEY 111
            TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSIIPQDPTMFEGTVRSNLDPLEEY
Sbjct: 1257 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1316

Query: 110  KDEEIWEALDKCQLGDEVRKKEWKLDSLVTADGEIW 3
             DE+IWEALDKCQLGDEVRKKE KLDS V  +GE W
Sbjct: 1317 SDEQIWEALDKCQLGDEVRKKEGKLDSAVNENGENW 1352


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