BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033996
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...    93   3e-17
emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]    93   3e-17
ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15
ref|XP_002884507.1| pentatricopeptide repeat-containing protein ...    81   8e-14
ref|NP_187185.2| pentatricopeptide repeat-containing protein [Ar...    76   2e-12

>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = +1

Query: 52  QASLTSVLSACDNPDMLYVCMMMHCLVLRNGYEQEVSVGNALITNYFKCGCCESGRRVFC 231
           QA+LT+VL+ACD P+  YV  M+H LV   GYE+E++VGNALIT+YF+CGCC SGRRVF 
Sbjct: 156 QATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFD 215

Query: 232 EM 237
           EM
Sbjct: 216 EM 217


>emb|CAN74829.1| hypothetical protein VITISV_002140 [Vitis vinifera]
          Length = 542

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 41/62 (66%), Positives = 51/62 (82%)
 Frame = +1

Query: 52  QASLTSVLSACDNPDMLYVCMMMHCLVLRNGYEQEVSVGNALITNYFKCGCCESGRRVFC 231
           QA+LT+VL+ACD P+  YV  M+H LV   GYE+E++VGNALIT+YF+CGCC SGRRVF 
Sbjct: 42  QATLTTVLTACDKPEFCYVSKMIHSLVFLYGYEREITVGNALITSYFRCGCCSSGRRVFD 101

Query: 232 EM 237
           EM
Sbjct: 102 EM 103


>ref|XP_002319538.1| predicted protein [Populus trichocarpa] gi|222857914|gb|EEE95461.1|
           predicted protein [Populus trichocarpa]
          Length = 577

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/62 (59%), Positives = 51/62 (82%)
 Frame = +1

Query: 52  QASLTSVLSACDNPDMLYVCMMMHCLVLRNGYEQEVSVGNALITNYFKCGCCESGRRVFC 231
           QA+LT++LSACD P++ +V  M+HCL + NG+++E+SVGNALIT+YFKCG   SG +VF 
Sbjct: 59  QATLTTILSACDRPELGFVNKMVHCLAVLNGFQREISVGNALITSYFKCGFSSSGMQVFD 118

Query: 232 EM 237
           EM
Sbjct: 119 EM 120


>ref|XP_002884507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297330347|gb|EFH60766.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 676

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/62 (59%), Positives = 46/62 (74%)
 Frame = +1

Query: 52  QASLTSVLSACDNPDMLYVCMMMHCLVLRNGYEQEVSVGNALITNYFKCGCCESGRRVFC 231
           QA+LT VLS CD P+   V  M+H L + +GY++E+SVGN LIT+YFKCGC  SGR VF 
Sbjct: 155 QATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRWVFS 214

Query: 232 EM 237
           EM
Sbjct: 215 EM 216


>ref|NP_187185.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|218546760|sp|Q9MA85.2|PP215_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g05340 gi|332640702|gb|AEE74223.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 658

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 34/58 (58%), Positives = 43/58 (74%)
 Frame = +1

Query: 55  ASLTSVLSACDNPDMLYVCMMMHCLVLRNGYEQEVSVGNALITNYFKCGCCESGRRVF 228
           A+LT VLS CD P+   V  M+H L + +GY++E+SVGN LIT+YFKCGC  SGR VF
Sbjct: 156 ATLTIVLSVCDTPEFCLVTKMIHALAILSGYDKEISVGNKLITSYFKCGCSVSGRGVF 213