BLASTX nr result

ID: Coptis21_contig00033981 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033981
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro...   222   3e-56
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm...   173   2e-41
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro...   160   1e-37
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro...   160   1e-37
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2...   158   7e-37

>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
            vinifera]
          Length = 663

 Score =  222 bits (566), Expect = 3e-56
 Identities = 115/199 (57%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
 Frame = +1

Query: 1    RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNMTDSKSNS 180
            RRKS DRS S+ K  A++VAD+DE +S+SNAKV+PAT DYFHG K++  + ++ DS SNS
Sbjct: 419  RRKSLDRSNSIRKTAAAVVADLDESKSVSNAKVSPATIDYFHGPKLIPADKDLRDSNSNS 478

Query: 181  IKDDRSESFESAFRDAASVP-----KESKKSSRWSKGWNIWGLIHRRSGRKNGDKERYCR 345
            ++DD SE+FE AFRDAASV      K SKKSSRWSK WNIWG IHRRSG K+ D +R+ R
Sbjct: 479  LRDDCSETFEMAFRDAASVTGNGERKGSKKSSRWSKAWNIWGFIHRRSGTKDEDDDRFSR 538

Query: 346  RNGVDRSLSGSWPELRREGNGKANESFDRKXXXXXXXXXXXXXXXTDGLLGSMRSSSVQT 525
             NGV+RSLS SWPELR E NG    +F+RK                 G   S R SS ++
Sbjct: 539  VNGVERSLSESWPELRGERNGDVRGAFNRKVFRSNSSVSSRNSFTMGGSFSSTRKSSAES 598

Query: 526  NGHVKKRREEFVLERNRSA 582
            NGH KKRR+EFVLERNRSA
Sbjct: 599  NGHGKKRRDEFVLERNRSA 617


>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
            gi|223525005|gb|EEF27813.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 676

 Score =  173 bits (438), Expect = 2e-41
 Identities = 101/213 (47%), Positives = 135/213 (63%), Gaps = 19/213 (8%)
 Frame = +1

Query: 1    RRKSFDRSTSVGKATASMVADVDELRS----ISNAKVTPATSD-------YFHGAKVLVT 147
            RRKS DRS S+ K  A++VA++DEL+S    ISN+KV+PAT+        Y HG K+++ 
Sbjct: 428  RRKSLDRSNSIRKTAAAVVAEIDELKSAASVISNSKVSPATTTSTMTADYYIHGPKLVLP 487

Query: 148  ECNMTDSKSNSIKDDRSESFESAFRDAA---SVPKESKKSSRWSKGWNIWGLIHRRSGRK 318
            + + ++S SNS++DD SE+FE  FRD A      K +KKS RWSK WNIWG IHRRS  K
Sbjct: 488  DRD-SNSNSNSLRDDCSETFEMGFRDNAVENGERKGAKKSRRWSKAWNIWGFIHRRSVNK 546

Query: 319  NGDKERYCRRNGVDRSLSGSWPELRREGNG-----KANESFDRKXXXXXXXXXXXXXXXT 483
            + +++RY R NGV+RS S SWPELR E N      ++N S   +                
Sbjct: 547  DEEEDRYSRGNGVERSFSESWPELRGERNNNPKILRSNSSVSWRNSNGFGG--------- 597

Query: 484  DGLLGSMRSSSVQTNGHVKKRREEFVLERNRSA 582
             G  GS R S+V+TNGH +K+++EFVLERNRSA
Sbjct: 598  GGSFGSARKSNVETNGHGRKKKDEFVLERNRSA 630


>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 662

 Score =  160 bits (405), Expect = 1e-37
 Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 6/200 (3%)
 Frame = +1

Query: 1   RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNM-TDSKSN 177
           RR+S DRS+S+ K  A++VAD+D+++S SNAKV+PAT+D+F G K++V +  +  DS SN
Sbjct: 433 RRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSGPKLVVPDNKLQRDSNSN 492

Query: 178 SIKDDRSESFESAFRDAASVPKESKKSSRWSKGWNIWGLIHRRSGRKNGDKERY-CRRNG 354
           S++DD SE+FE  FR+     KE+KKS RW KGWNIW  I+RR+G K  D++RY  R NG
Sbjct: 493 SLRDDCSETFEIPFRNGDR--KETKKSRRWGKGWNIWAFIYRRTGNKYEDEDRYSSRTNG 550

Query: 355 VDRSLSGSWPELRREGNGK----ANESFDRKXXXXXXXXXXXXXXXTDGLLGSMRSSSVQ 522
           V RSLS SWPE R E NG+        F+ K                     S+   S Q
Sbjct: 551 VTRSLSESWPEFRGERNGEVRGIGGMGFNPKMMRSN---------------SSVSWRSSQ 595

Query: 523 TNGHVKKRREEFVLERNRSA 582
           +N    K++E+FVLERN+SA
Sbjct: 596 SNSGGSKKKEDFVLERNQSA 615


>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
           sativus]
          Length = 655

 Score =  160 bits (405), Expect = 1e-37
 Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 6/200 (3%)
 Frame = +1

Query: 1   RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNM-TDSKSN 177
           RR+S DRS+S+ K  A++VAD+D+++S SNAKV+PAT+D+F G K++V +  +  DS SN
Sbjct: 426 RRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSGPKLVVPDNKLQRDSNSN 485

Query: 178 SIKDDRSESFESAFRDAASVPKESKKSSRWSKGWNIWGLIHRRSGRKNGDKERY-CRRNG 354
           S++DD SE+FE  FR+     KE+KKS RW KGWNIW  I+RR+G K  D++RY  R NG
Sbjct: 486 SLRDDCSETFEIPFRNGDR--KETKKSRRWGKGWNIWAFIYRRTGNKYEDEDRYSSRTNG 543

Query: 355 VDRSLSGSWPELRREGNGK----ANESFDRKXXXXXXXXXXXXXXXTDGLLGSMRSSSVQ 522
           V RSLS SWPE R E NG+        F+ K                     S+   S Q
Sbjct: 544 VTRSLSESWPEFRGERNGEVRGIGGMGFNPKMMRSN---------------SSVSWRSSQ 588

Query: 523 TNGHVKKRREEFVLERNRSA 582
           +N    K++E+FVLERN+SA
Sbjct: 589 SNSGGSKKKEDFVLERNQSA 608


>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  158 bits (399), Expect = 7e-37
 Identities = 91/202 (45%), Positives = 116/202 (57%), Gaps = 8/202 (3%)
 Frame = +1

Query: 1   RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNMTDSKSNS 180
           RRKS DRS S+ K  A++VA++DEL+++                  +V + +  DS SNS
Sbjct: 399 RRKSLDRSNSIRKTAAAVVAEIDELKAL------------------VVPDRDFRDSNSNS 440

Query: 181 IKDDRSESFESAFRDAASVP------KESKKSSRWSKGWNIWGLIHRRSGRKNGDKERYC 342
           ++DD SE+F+  FRD AS+       K +KK  RWSK WNIWG IHRRS  K  D +RY 
Sbjct: 441 LRDDCSETFDMGFRDNASLVGGNGERKGAKKPRRWSKAWNIWGFIHRRSVNKEDDDDRYS 500

Query: 343 RRNGVDRSLSGSWPELRREGNGKANESFDRK--XXXXXXXXXXXXXXXTDGLLGSMRSSS 516
           R NGV+RS S SWPELR E NG     F+ K                   G   S R SS
Sbjct: 501 RANGVERSFSESWPELRGERNGDVRGGFNPKILRSNSSVSWRNSHNFGGGGSFSSARKSS 560

Query: 517 VQTNGHVKKRREEFVLERNRSA 582
           V+TNG+ +K+R+EFVLERNRSA
Sbjct: 561 VETNGNGRKKRDEFVLERNRSA 582


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