BLASTX nr result
ID: Coptis21_contig00033981
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis21_contig00033981
(584 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloro... 222 3e-56
ref|XP_002534570.1| conserved hypothetical protein [Ricinus comm... 173 2e-41
ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloro... 160 1e-37
ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloro... 160 1e-37
ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|2... 158 7e-37
>ref|XP_002273894.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Vitis
vinifera]
Length = 663
Score = 222 bits (566), Expect = 3e-56
Identities = 115/199 (57%), Positives = 139/199 (69%), Gaps = 5/199 (2%)
Frame = +1
Query: 1 RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNMTDSKSNS 180
RRKS DRS S+ K A++VAD+DE +S+SNAKV+PAT DYFHG K++ + ++ DS SNS
Sbjct: 419 RRKSLDRSNSIRKTAAAVVADLDESKSVSNAKVSPATIDYFHGPKLIPADKDLRDSNSNS 478
Query: 181 IKDDRSESFESAFRDAASVP-----KESKKSSRWSKGWNIWGLIHRRSGRKNGDKERYCR 345
++DD SE+FE AFRDAASV K SKKSSRWSK WNIWG IHRRSG K+ D +R+ R
Sbjct: 479 LRDDCSETFEMAFRDAASVTGNGERKGSKKSSRWSKAWNIWGFIHRRSGTKDEDDDRFSR 538
Query: 346 RNGVDRSLSGSWPELRREGNGKANESFDRKXXXXXXXXXXXXXXXTDGLLGSMRSSSVQT 525
NGV+RSLS SWPELR E NG +F+RK G S R SS ++
Sbjct: 539 VNGVERSLSESWPELRGERNGDVRGAFNRKVFRSNSSVSSRNSFTMGGSFSSTRKSSAES 598
Query: 526 NGHVKKRREEFVLERNRSA 582
NGH KKRR+EFVLERNRSA
Sbjct: 599 NGHGKKRRDEFVLERNRSA 617
>ref|XP_002534570.1| conserved hypothetical protein [Ricinus communis]
gi|223525005|gb|EEF27813.1| conserved hypothetical
protein [Ricinus communis]
Length = 676
Score = 173 bits (438), Expect = 2e-41
Identities = 101/213 (47%), Positives = 135/213 (63%), Gaps = 19/213 (8%)
Frame = +1
Query: 1 RRKSFDRSTSVGKATASMVADVDELRS----ISNAKVTPATSD-------YFHGAKVLVT 147
RRKS DRS S+ K A++VA++DEL+S ISN+KV+PAT+ Y HG K+++
Sbjct: 428 RRKSLDRSNSIRKTAAAVVAEIDELKSAASVISNSKVSPATTTSTMTADYYIHGPKLVLP 487
Query: 148 ECNMTDSKSNSIKDDRSESFESAFRDAA---SVPKESKKSSRWSKGWNIWGLIHRRSGRK 318
+ + ++S SNS++DD SE+FE FRD A K +KKS RWSK WNIWG IHRRS K
Sbjct: 488 DRD-SNSNSNSLRDDCSETFEMGFRDNAVENGERKGAKKSRRWSKAWNIWGFIHRRSVNK 546
Query: 319 NGDKERYCRRNGVDRSLSGSWPELRREGNG-----KANESFDRKXXXXXXXXXXXXXXXT 483
+ +++RY R NGV+RS S SWPELR E N ++N S +
Sbjct: 547 DEEEDRYSRGNGVERSFSESWPELRGERNNNPKILRSNSSVSWRNSNGFGG--------- 597
Query: 484 DGLLGSMRSSSVQTNGHVKKRREEFVLERNRSA 582
G GS R S+V+TNGH +K+++EFVLERNRSA
Sbjct: 598 GGSFGSARKSNVETNGHGRKKKDEFVLERNRSA 630
>ref|XP_004171704.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
sativus]
Length = 662
Score = 160 bits (405), Expect = 1e-37
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 6/200 (3%)
Frame = +1
Query: 1 RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNM-TDSKSN 177
RR+S DRS+S+ K A++VAD+D+++S SNAKV+PAT+D+F G K++V + + DS SN
Sbjct: 433 RRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSGPKLVVPDNKLQRDSNSN 492
Query: 178 SIKDDRSESFESAFRDAASVPKESKKSSRWSKGWNIWGLIHRRSGRKNGDKERY-CRRNG 354
S++DD SE+FE FR+ KE+KKS RW KGWNIW I+RR+G K D++RY R NG
Sbjct: 493 SLRDDCSETFEIPFRNGDR--KETKKSRRWGKGWNIWAFIYRRTGNKYEDEDRYSSRTNG 550
Query: 355 VDRSLSGSWPELRREGNGK----ANESFDRKXXXXXXXXXXXXXXXTDGLLGSMRSSSVQ 522
V RSLS SWPE R E NG+ F+ K S+ S Q
Sbjct: 551 VTRSLSESWPEFRGERNGEVRGIGGMGFNPKMMRSN---------------SSVSWRSSQ 595
Query: 523 TNGHVKKRREEFVLERNRSA 582
+N K++E+FVLERN+SA
Sbjct: 596 SNSGGSKKKEDFVLERNQSA 615
>ref|XP_004147926.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
sativus]
Length = 655
Score = 160 bits (405), Expect = 1e-37
Identities = 93/200 (46%), Positives = 126/200 (63%), Gaps = 6/200 (3%)
Frame = +1
Query: 1 RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNM-TDSKSN 177
RR+S DRS+S+ K A++VAD+D+++S SNAKV+PAT+D+F G K++V + + DS SN
Sbjct: 426 RRRSLDRSSSLRKTAAAVVADMDDIKSSSNAKVSPATADFFSGPKLVVPDNKLQRDSNSN 485
Query: 178 SIKDDRSESFESAFRDAASVPKESKKSSRWSKGWNIWGLIHRRSGRKNGDKERY-CRRNG 354
S++DD SE+FE FR+ KE+KKS RW KGWNIW I+RR+G K D++RY R NG
Sbjct: 486 SLRDDCSETFEIPFRNGDR--KETKKSRRWGKGWNIWAFIYRRTGNKYEDEDRYSSRTNG 543
Query: 355 VDRSLSGSWPELRREGNGK----ANESFDRKXXXXXXXXXXXXXXXTDGLLGSMRSSSVQ 522
V RSLS SWPE R E NG+ F+ K S+ S Q
Sbjct: 544 VTRSLSESWPEFRGERNGEVRGIGGMGFNPKMMRSN---------------SSVSWRSSQ 588
Query: 523 TNGHVKKRREEFVLERNRSA 582
+N K++E+FVLERN+SA
Sbjct: 589 SNSGGSKKKEDFVLERNQSA 608
>ref|XP_002322958.1| predicted protein [Populus trichocarpa] gi|222867588|gb|EEF04719.1|
predicted protein [Populus trichocarpa]
Length = 628
Score = 158 bits (399), Expect = 7e-37
Identities = 91/202 (45%), Positives = 116/202 (57%), Gaps = 8/202 (3%)
Frame = +1
Query: 1 RRKSFDRSTSVGKATASMVADVDELRSISNAKVTPATSDYFHGAKVLVTECNMTDSKSNS 180
RRKS DRS S+ K A++VA++DEL+++ +V + + DS SNS
Sbjct: 399 RRKSLDRSNSIRKTAAAVVAEIDELKAL------------------VVPDRDFRDSNSNS 440
Query: 181 IKDDRSESFESAFRDAASVP------KESKKSSRWSKGWNIWGLIHRRSGRKNGDKERYC 342
++DD SE+F+ FRD AS+ K +KK RWSK WNIWG IHRRS K D +RY
Sbjct: 441 LRDDCSETFDMGFRDNASLVGGNGERKGAKKPRRWSKAWNIWGFIHRRSVNKEDDDDRYS 500
Query: 343 RRNGVDRSLSGSWPELRREGNGKANESFDRK--XXXXXXXXXXXXXXXTDGLLGSMRSSS 516
R NGV+RS S SWPELR E NG F+ K G S R SS
Sbjct: 501 RANGVERSFSESWPELRGERNGDVRGGFNPKILRSNSSVSWRNSHNFGGGGSFSSARKSS 560
Query: 517 VQTNGHVKKRREEFVLERNRSA 582
V+TNG+ +K+R+EFVLERNRSA
Sbjct: 561 VETNGNGRKKRDEFVLERNRSA 582