BLASTX nr result

ID: Coptis21_contig00033962 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033962
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16036.3| unnamed protein product [Vitis vinifera]              139   3e-31
ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinif...   139   3e-31
ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinif...   137   1e-30
ref|XP_002313412.1| copper transporter [Populus trichocarpa] gi|...   137   2e-30
ref|XP_002276084.1| PREDICTED: copper transporter 6 [Vitis vinif...   131   9e-29

>emb|CBI16036.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  139 bits (351), Expect = 3e-31
 Identities = 69/124 (55%), Positives = 87/124 (70%), Gaps = 10/124 (8%)
 Frame = -2

Query: 459 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISQSKFIKKGSSHVSAGLLET 280
           +FYWGK AEILFSGWPGT +GMY             VEW+S  + IK GS+HV+AG+++T
Sbjct: 37  TFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQT 96

Query: 279 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHSVGFLVFRSR----------DEKPGHLP 130
           L+H IR GL Y+VMLA+MSFNGG+F+VAVAGH+VGFLVF SR           EK  +L 
Sbjct: 97  LLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRGSETLRPSEKAFYLS 156

Query: 129 PITC 118
           P++C
Sbjct: 157 PMSC 160


>ref|XP_002280132.1| PREDICTED: copper transporter 1 [Vitis vinifera]
           gi|321496076|gb|ADW93915.1| copper transporter [Vitis
           vinifera]
          Length = 177

 Score =  139 bits (351), Expect = 3e-31
 Identities = 69/124 (55%), Positives = 87/124 (70%), Gaps = 10/124 (8%)
 Frame = -2

Query: 459 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISQSKFIKKGSSHVSAGLLET 280
           +FYWGK AEILFSGWPGT +GMY             VEW+S  + IK GS+HV+AG+++T
Sbjct: 54  TFYWGKKAEILFSGWPGTRSGMYALALIVVFVMAIIVEWLSHFQLIKPGSTHVAAGVVQT 113

Query: 279 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHSVGFLVFRSR----------DEKPGHLP 130
           L+H IR GL Y+VMLA+MSFNGG+F+VAVAGH+VGFLVF SR           EK  +L 
Sbjct: 114 LLHAIRMGLEYMVMLALMSFNGGMFLVAVAGHAVGFLVFGSRLFRGSETLRPSEKAFYLS 173

Query: 129 PITC 118
           P++C
Sbjct: 174 PMSC 177


>ref|XP_002280121.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496078|gb|ADW93916.1| copper transporter [Vitis
           vinifera]
          Length = 151

 Score =  137 bits (346), Expect = 1e-30
 Identities = 65/102 (63%), Positives = 79/102 (77%)
 Frame = -2

Query: 459 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISQSKFIKKGSSHVSAGLLET 280
           +FYWGK AEILFSGWPG  +GMY             VEW+S  + IK GS+H +AGL++T
Sbjct: 33  TFYWGKEAEILFSGWPGARSGMYALALIVVFVMGIIVEWLSYCRLIKPGSTHAAAGLVQT 92

Query: 279 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHSVGFLVFRSR 154
           L+HTIR GL+Y+VMLA+MSFNGGVF+VAVAGH+VGFLVF SR
Sbjct: 93  LLHTIRIGLAYMVMLALMSFNGGVFLVAVAGHAVGFLVFGSR 134


>ref|XP_002313412.1| copper transporter [Populus trichocarpa]
           gi|222849820|gb|EEE87367.1| copper transporter [Populus
           trichocarpa]
          Length = 155

 Score =  137 bits (344), Expect = 2e-30
 Identities = 65/111 (58%), Positives = 81/111 (72%)
 Frame = -2

Query: 459 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISQSKFIKKGSSHVSAGLLET 280
           +F+WGK+  ILFSGWPGTSTGMY             VEW+S  + +K GS++V+AGL++ 
Sbjct: 33  TFFWGKDTLILFSGWPGTSTGMYVLALVFIFVLAVLVEWLSHCRLVKPGSNNVAAGLIQA 92

Query: 279 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHSVGFLVFRSRDEKPGHLPP 127
           LMH +R GL+Y+VMLAVMSFNGGVFIVAVAGH VGF +F SR  K   +PP
Sbjct: 93  LMHAVRVGLAYMVMLAVMSFNGGVFIVAVAGHLVGFFIFGSRVFKDTEMPP 143


>ref|XP_002276084.1| PREDICTED: copper transporter 6 [Vitis vinifera]
           gi|321496072|gb|ADW93913.1| copper transporter [Vitis
           vinifera]
          Length = 152

 Score =  131 bits (330), Expect = 9e-29
 Identities = 59/102 (57%), Positives = 78/102 (76%)
 Frame = -2

Query: 459 SFYWGKNAEILFSGWPGTSTGMYXXXXXXXXXXXXXVEWISQSKFIKKGSSHVSAGLLET 280
           +F+WGKNAEILFSGWPGTS+GMY             +EW+S+S  +K G  +V+ GLL+T
Sbjct: 31  TFFWGKNAEILFSGWPGTSSGMYALALILVFVVALLLEWLSRSSLLKPGPHNVTTGLLQT 90

Query: 279 LMHTIRSGLSYLVMLAVMSFNGGVFIVAVAGHSVGFLVFRSR 154
            ++ IRSG SY++MLAVMSFNGG+F+ AVAGH++GFL+F SR
Sbjct: 91  ALYAIRSGFSYMLMLAVMSFNGGIFLAAVAGHALGFLIFGSR 132


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