BLASTX nr result

ID: Coptis21_contig00033912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033912
         (454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI24880.3| unnamed protein product [Vitis vinifera]              104   6e-21
gb|ACH81294.1| telomerase reverse transcriptase [Populus trichoc...    94   1e-17
ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase r...    92   3e-17
ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-...    92   3e-17
gb|AEB33868.1| telomerase reverse transcriptase, partial [Nicoti...    86   2e-15

>emb|CBI24880.3| unnamed protein product [Vitis vinifera]
          Length = 1108

 Score =  104 bits (260), Expect = 6e-21
 Identities = 61/146 (41%), Positives = 81/146 (55%), Gaps = 2/146 (1%)
 Frame = +2

Query: 23  AKNKS--KWRIPEVLRRIYGRQAHTLAETTIGLLHTQXXXXXXXXXXXXXXXXXXXXXXX 196
           AKN+   K R+PE+L R++  +A TLA+T + L+                          
Sbjct: 2   AKNRKRRKRRVPEILWRLFRHRARTLADTIVSLIPPLPHCGCNGRRCLGCIGGDAD---- 57

Query: 197 XXXXMSYLLRRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMTMHD 376
                SYLLR  DP DY+KLL+E + VVS NAPPLS  Y   RWSQ QIV++ IEM M +
Sbjct: 58  -----SYLLRPQDPCDYRKLLSECFVVVSYNAPPLSTIYLDRRWSQLQIVRKTIEMIMCE 112

Query: 377 VQVSPNAICSGYNKCSQSSKVVDLLT 454
              S N +C GY+KC+  S +V+LLT
Sbjct: 113 QPGSSNVLCGGYSKCNNLSSIVELLT 138


>gb|ACH81294.1| telomerase reverse transcriptase [Populus trichocarpa]
          Length = 1128

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/144 (36%), Positives = 77/144 (53%)
 Frame = +2

Query: 23  AKNKSKWRIPEVLRRIYGRQAHTLAETTIGLLHTQXXXXXXXXXXXXXXXXXXXXXXXXX 202
           +K K+K R+PEVL R++  +A TL+ T   L+                            
Sbjct: 2   SKKKTKGRVPEVLWRVFRYRARTLSNTVTSLIANPPSSFV-------------------- 41

Query: 203 XXMSYLLRRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMTMHDVQ 382
                L + DDP++Y+KLL + Y V+SDNAPP++ F    RW Q  IV RIIE  + +  
Sbjct: 42  -----LFKADDPANYRKLLKDCYIVLSDNAPPVAHFNLENRWPQPLIVSRIIEFIITEQP 96

Query: 383 VSPNAICSGYNKCSQSSKVVDLLT 454
           +S N +CSGY+KC +SS + ++LT
Sbjct: 97  LSNNVLCSGYDKCLRSSPIAEVLT 120


>ref|XP_004161414.1| PREDICTED: LOW QUALITY PROTEIN: telomerase reverse
           transcriptase-like [Cucumis sativus]
          Length = 1146

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 54/136 (39%), Positives = 72/136 (52%)
 Frame = +2

Query: 47  IPEVLRRIYGRQAHTLAETTIGLLHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXMSYLLR 226
           +PEVL R++  +A TLA+T   LL                                +LLR
Sbjct: 7   VPEVLWRLFSHRARTLADTITSLLPPPDCRCHKRRCLRCSAATPD----------GFLLR 56

Query: 227 RDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMTMHDVQVSPNAICS 406
            DDPS Y++LLT+ Y V+SD A P+S F +  RWSQ+QIV R I+M +    V  N IC 
Sbjct: 57  PDDPSHYRQLLTQCYVVISDKASPVSDFSNESRWSQRQIVVRCIQMLISTQPVDSNLICC 116

Query: 407 GYNKCSQSSKVVDLLT 454
           G+N  + SS +VDLLT
Sbjct: 117 GFNTLALSSPIVDLLT 132


>ref|XP_004149615.1| PREDICTED: telomerase reverse transcriptase-like [Cucumis sativus]
          Length = 1146

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 54/136 (39%), Positives = 72/136 (52%)
 Frame = +2

Query: 47  IPEVLRRIYGRQAHTLAETTIGLLHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXMSYLLR 226
           +PEVL R++  +A TLA+T   LL                                +LLR
Sbjct: 7   VPEVLWRLFSHRARTLADTITSLLPPPDCRCHKRRCLRCSAATPD----------GFLLR 56

Query: 227 RDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMTMHDVQVSPNAICS 406
            DDPS Y++LLT+ Y V+SD A P+S F +  RWSQ+QIV R I+M +    V  N IC 
Sbjct: 57  PDDPSHYRQLLTQCYVVISDKASPVSDFSNESRWSQRQIVVRCIQMLISTQPVDSNLICC 116

Query: 407 GYNKCSQSSKVVDLLT 454
           G+N  + SS +VDLLT
Sbjct: 117 GFNTLALSSPIVDLLT 132


>gb|AEB33868.1| telomerase reverse transcriptase, partial [Nicotiana tabacum]
          Length = 181

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/137 (35%), Positives = 74/137 (54%)
 Frame = +2

Query: 44  RIPEVLRRIYGRQAHTLAETTIGLLHTQXXXXXXXXXXXXXXXXXXXXXXXXXXXMSYLL 223
           R+P VL R++  +A TL  T + L+ ++                            S+L+
Sbjct: 7   RVPPVLWRLFHNRARTLGHTILSLVPSKTSTNCLCKGRQCLGCVGENGAT------SFLI 60

Query: 224 RRDDPSDYKKLLTESYAVVSDNAPPLSFFYSGCRWSQQQIVKRIIEMTMHDVQVSPNAIC 403
           R  D  DY+KLL + + V+SD+ PPL  +   CRWS  ++V+R IEMT+  ++   N IC
Sbjct: 61  REKDSDDYRKLLNKCFVVLSDSTPPLHVYDPHCRWSHLELVRRTIEMTI--IEQPNNVIC 118

Query: 404 SGYNKCSQSSKVVDLLT 454
           SGY+K S+ S +V+LLT
Sbjct: 119 SGYDKMSRFSDIVELLT 135


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