BLASTX nr result

ID: Coptis21_contig00033905 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033905
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521436.1| transcription factor, putative [Ricinus comm...    95   7e-18
ref|XP_003545844.1| PREDICTED: B3 domain-containing protein Os07...    89   3e-16
ref|XP_002305001.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_003593434.1| B3 domain-containing transcription repressor...    89   4e-16
ref|XP_003543088.1| PREDICTED: B3 domain-containing protein Os07...    88   8e-16

>ref|XP_002521436.1| transcription factor, putative [Ricinus communis]
           gi|223539335|gb|EEF40926.1| transcription factor,
           putative [Ricinus communis]
          Length = 854

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 57/143 (39%), Positives = 73/143 (51%), Gaps = 39/143 (27%)
 Frame = -1

Query: 314 APILGKSTIFTTDHDG--------------------------------------SLCSSA 249
           APILGK TIF TD+ G                                      SLCS+ 
Sbjct: 522 APILGKPTIFATDNSGQKVQWVQCEDCFKWRKLPANADLPSKWTCTGNSWDPERSLCSAT 581

Query: 248 QEVTSK*LQDVVSSNKTGPSKKSGAVNKDENTVEVSEGLCTLGNIAIQGQDNTLP-PVQT 72
           QE+T++ ++D++ S     SKK  A  ++   VE  EGL TL N+AI G++  LP   Q 
Sbjct: 582 QELTAEQIEDLLPSCNIVASKKLKAAKQETENVEALEGLDTLANLAILGENEALPASSQA 641

Query: 71  TTKHPCHSSGCTCIVCIQPPTGK 3
           TTKHP H  GC+CIVCIQPP+GK
Sbjct: 642 TTKHPRHRPGCSCIVCIQPPSGK 664


>ref|XP_003545844.1| PREDICTED: B3 domain-containing protein Os07g0563300-like [Glycine
           max]
          Length = 854

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 54/143 (37%), Positives = 71/143 (49%), Gaps = 39/143 (27%)
 Frame = -1

Query: 314 APILGKSTIFTTDHDG--------------------------------------SLCSSA 249
           AP+LGK TIFT+D  G                                      S CS+A
Sbjct: 524 APVLGKPTIFTSDSVGEKIQWAQCEDCFKWRKLPASALLPSKWTCSDNSWDPERSSCSAA 583

Query: 248 QEVTSK*LQDVVSSNKTGPSKKSGAVNKDENTVEVSEGLCTLGNIAIQGQDNTLPP-VQT 72
           QE+T++ L++++    +   KK  A  +D +  E  EGL TL N+AI G+   LP   Q 
Sbjct: 584 QELTAEQLENLLPPCSSAVPKKMKAAKQDPDNAEALEGLDTLANLAILGEGEALPASAQA 643

Query: 71  TTKHPCHSSGCTCIVCIQPPTGK 3
           TTKHP H  GC+CIVCIQPP+GK
Sbjct: 644 TTKHPRHRPGCSCIVCIQPPSGK 666


>ref|XP_002305001.1| predicted protein [Populus trichocarpa] gi|222847965|gb|EEE85512.1|
            predicted protein [Populus trichocarpa]
          Length = 918

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 58/144 (40%), Positives = 72/144 (50%), Gaps = 40/144 (27%)
 Frame = -1

Query: 314  APILGKSTIFTTDHDG--------------------------------------SLCSSA 249
            AP+LGK TIF TD+ G                                      S CS A
Sbjct: 574  APVLGKPTIFATDNVGQKIQWVQCEDCLKWRKLPANALLPSKWACSSNTWDPERSSCSVA 633

Query: 248  QEVTSK*LQDVVSS-NKTGPSKKSGAVNKDENTVEVSEGLCTLGNIAIQGQDNTLPPV-Q 75
            QE+T++ L+D++ S N    SK+S    KD + VE  EGL TL N+AI G+    P   Q
Sbjct: 634  QELTAEQLEDLLPSCNLVVTSKRSKDAKKDIDRVEALEGLDTLANLAILGEGEAFPASSQ 693

Query: 74   TTTKHPCHSSGCTCIVCIQPPTGK 3
             TTKHP H  GC+CIVCIQPP+GK
Sbjct: 694  ATTKHPRHRPGCSCIVCIQPPSGK 717


>ref|XP_003593434.1| B3 domain-containing transcription repressor VAL2 [Medicago
           truncatula] gi|355482482|gb|AES63685.1| B3
           domain-containing transcription repressor VAL2 [Medicago
           truncatula]
          Length = 888

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 54/142 (38%), Positives = 73/142 (51%), Gaps = 38/142 (26%)
 Frame = -1

Query: 314 APILGKSTIFTTDHDG--------------------------------------SLCSSA 249
           AP+LGK +IFT+D+ G                                      S CS+A
Sbjct: 557 APVLGKPSIFTSDNMGERIQWARCEDCLKWRKLPACALLPAKWTCSDNSWDPERSSCSAA 616

Query: 248 QEVTSK*LQDVVSSNKTGPSKKSGAVNKDENTVEVSEGLCTLGNIAIQGQDNTLPPVQTT 69
           QE+T++ L++++    +  SKK  A  +D +  E  EGL TL N+AI G+   LP  Q T
Sbjct: 617 QELTTEQLENLLPPCNS-VSKKMKATKQDPDHAEALEGLDTLANLAILGEGEALPSSQAT 675

Query: 68  TKHPCHSSGCTCIVCIQPPTGK 3
           TKHP H  GC+CIVCIQPP+GK
Sbjct: 676 TKHPRHRPGCSCIVCIQPPSGK 697


>ref|XP_003543088.1| PREDICTED: B3 domain-containing protein Os07g0563300-like isoform 2
           [Glycine max]
          Length = 855

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 53/143 (37%), Positives = 70/143 (48%), Gaps = 39/143 (27%)
 Frame = -1

Query: 314 APILGKSTIFTTDHDGSL--------------------------------------CSSA 249
           AP+LGK TIFT+D  G                                        CS+A
Sbjct: 525 APVLGKPTIFTSDSVGEKIQWAQCEDCFKWRKLPASALLPSKWTCSDNSWDPERFSCSAA 584

Query: 248 QEVTSK*LQDVVSSNKTGPSKKSGAVNKDENTVEVSEGLCTLGNIAIQGQDNTLPP-VQT 72
           QE+T++ L++++    +   KK  A  +D +  E  EGL TL N+AI G+   LP   Q 
Sbjct: 585 QELTAEQLENLLPPCNSAVPKKMKATKQDPDNAEALEGLDTLANLAILGEGEALPASAQA 644

Query: 71  TTKHPCHSSGCTCIVCIQPPTGK 3
           TTKHP H  GC+CIVCIQPP+GK
Sbjct: 645 TTKHPRHRPGCSCIVCIQPPSGK 667


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