BLASTX nr result

ID: Coptis21_contig00033899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033899
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267164.2| PREDICTED: probably inactive leucine-rich re...   100   2e-19
emb|CBI23354.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|NP_001238083.1| protein kinase precursor [Glycine max] gi|21...    94   1e-17
ref|XP_002527290.1| ATP binding protein, putative [Ricinus commu...    92   4e-17
emb|CAN63265.1| hypothetical protein VITISV_037939 [Vitis vinifera]    92   4e-17

>ref|XP_002267164.2| PREDICTED: probably inactive leucine-rich repeat receptor-like
           protein kinase At5g48380-like [Vitis vinifera]
          Length = 621

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 MNLFNRIVALLFHVLFCCFLSC--RVCHGGASDIYCLRTLKDSLQDPLNYLTSSWNFNNQ 71
           M L ++ + ++ H L    L     VC+   +DIYCL+T+K+SLQDP NYL  SWNFNN 
Sbjct: 1   MALTSKYLVVVAHSLIWVVLLSYSSVCYATETDIYCLKTIKNSLQDPNNYLNFSWNFNNN 60

Query: 70  SEGFICKFPGIDCWKSDENRVLN 2
           +EGFICKF GIDCW  DENRVLN
Sbjct: 61  TEGFICKFAGIDCWHPDENRVLN 83


>emb|CBI23354.3| unnamed protein product [Vitis vinifera]
          Length = 625

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 47/83 (56%), Positives = 58/83 (69%), Gaps = 2/83 (2%)
 Frame = -3

Query: 244 MNLFNRIVALLFHVLFCCFLSC--RVCHGGASDIYCLRTLKDSLQDPLNYLTSSWNFNNQ 71
           M L ++ + ++ H L    L     VC+   +DIYCL+T+K+SLQDP NYL  SWNFNN 
Sbjct: 1   MALTSKYLVVVAHSLIWVVLLSYSSVCYATETDIYCLKTIKNSLQDPNNYLNFSWNFNNN 60

Query: 70  SEGFICKFPGIDCWKSDENRVLN 2
           +EGFICKF GIDCW  DENRVLN
Sbjct: 61  TEGFICKFAGIDCWHPDENRVLN 83


>ref|NP_001238083.1| protein kinase precursor [Glycine max] gi|212717145|gb|ACJ37414.1|
           protein kinase [Glycine max]
          Length = 572

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 38/71 (53%), Positives = 55/71 (77%), Gaps = 2/71 (2%)
 Frame = -3

Query: 208 HVL--FCCFLSCRVCHGGASDIYCLRTLKDSLQDPLNYLTSSWNFNNQSEGFICKFPGID 35
           H+L  F   L C + +G  +DI+CL+++K+SL+DP NYL  SW+FNN++EG+IC+F G++
Sbjct: 11  HILVNFLLLLGCGITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVE 70

Query: 34  CWKSDENRVLN 2
           CW  DENRVLN
Sbjct: 71  CWHPDENRVLN 81


>ref|XP_002527290.1| ATP binding protein, putative [Ricinus communis]
           gi|223533383|gb|EEF35134.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 302

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 41/81 (50%), Positives = 56/81 (69%)
 Frame = -3

Query: 244 MNLFNRIVALLFHVLFCCFLSCRVCHGGASDIYCLRTLKDSLQDPLNYLTSSWNFNNQSE 65
           M L  R+  LL        LSC + +   +DI CL+++K SL+DPLN L SSW+FNN++E
Sbjct: 7   MMLGRRVSMLLISSSLWLLLSCSLSYATETDIACLKSIKASLEDPLNNLNSSWDFNNKTE 66

Query: 64  GFICKFPGIDCWKSDENRVLN 2
           G+ICKF G++CW  DEN+VLN
Sbjct: 67  GYICKFVGVECWHPDENKVLN 87


>emb|CAN63265.1| hypothetical protein VITISV_037939 [Vitis vinifera]
          Length = 619

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 38/77 (49%), Positives = 53/77 (68%)
 Frame = -3

Query: 232 NRIVALLFHVLFCCFLSCRVCHGGASDIYCLRTLKDSLQDPLNYLTSSWNFNNQSEGFIC 53
           +R + +   ++ C   S  + +   SD+YCL+ +K SL DP  YL SSW+FNN++EGFIC
Sbjct: 5   SRGLTVAIAIMLCLLWSSSLSYATESDLYCLKAIKKSLDDPYRYLNSSWDFNNKTEGFIC 64

Query: 52  KFPGIDCWKSDENRVLN 2
           +F GI+CW  DENRVLN
Sbjct: 65  RFTGIECWHPDENRVLN 81


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