BLASTX nr result

ID: Coptis21_contig00033896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033896
         (336 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vit...    55   6e-06
emb|CBI22513.3| unnamed protein product [Vitis vinifera]               55   6e-06

>ref|XP_002268899.2| PREDICTED: DNA repair protein REV1-like [Vitis vinifera]
          Length = 1175

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 44/116 (37%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
 Frame = -1

Query: 336  VKDIRGVGLQVSRLENADLASQGHEXXXXXXXXXXXXANMEEPTSSS----KER--IDGE 175
            VKDIRG+GLQVSRLENAD A QGH+            A  EE   +S    KER   DGE
Sbjct: 735  VKDIRGIGLQVSRLENADTAKQGHQRISIRSWLTSAPATNEELCKTSCLVRKERAVADGE 794

Query: 174  IPLLEGQHGTVSMKLAKPHYDGDSSKFVKNSTGPSYQVQTDQSRGEASLSRTSTLP 7
                            K   D    +   +S  PS Q+    S  EA L++ S LP
Sbjct: 795  ----------------KQSTDISLGQLSNDSKRPSLQMSPSSSNNEAPLNQVSELP 834


>emb|CBI22513.3| unnamed protein product [Vitis vinifera]
          Length = 1123

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 44/116 (37%), Positives = 52/116 (44%), Gaps = 6/116 (5%)
 Frame = -1

Query: 336  VKDIRGVGLQVSRLENADLASQGHEXXXXXXXXXXXXANMEEPTSSS----KER--IDGE 175
            VKDIRG+GLQVSRLENAD A QGH+            A  EE   +S    KER   DGE
Sbjct: 713  VKDIRGIGLQVSRLENADTAKQGHQRISIRSWLTSAPATNEELCKTSCLVRKERAVADGE 772

Query: 174  IPLLEGQHGTVSMKLAKPHYDGDSSKFVKNSTGPSYQVQTDQSRGEASLSRTSTLP 7
                            K   D    +   +S  PS Q+    S  EA L++ S LP
Sbjct: 773  ----------------KQSTDISLGQLSNDSKRPSLQMSPSSSNNEAPLNQVSELP 812


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