BLASTX nr result

ID: Coptis21_contig00033849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033849
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66573.1| hypothetical protein VITISV_028161 [Vitis vinifera]    91   8e-17
ref|XP_002945123.1| PREDICTED: copia protein-like [Xenopus (Silu...    90   2e-16
emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]    86   2e-15
emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]    81   8e-14
emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]    81   8e-14

>emb|CAN66573.1| hypothetical protein VITISV_028161 [Vitis vinifera]
          Length = 187

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 41/85 (48%), Positives = 59/85 (69%)
 Frame = -3

Query: 288 VQEAVWLRKFLIHLDIIAHTEAAVLLYSDSTAALAFAKDPKYHGKAKHIETHFHYIRDKV 109
           VQE VWL++FL  L II        +YSD  A +A+AKDPKYHG++KHI+T   +IRD +
Sbjct: 87  VQEVVWLKRFLKSLGIIKDVFGPTTIYSDKQAKIAYAKDPKYHGRSKHIDTKNSFIRDII 146

Query: 108 ATREVVLKHISTLNMLADPMTKPIA 34
           A ++V++K++ T  M+ DP TK I+
Sbjct: 147 ARKDVIMKYLPTREMVVDPFTKSIS 171


>ref|XP_002945123.1| PREDICTED: copia protein-like [Xenopus (Silurana) tropicalis]
          Length = 1858

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 43/86 (50%), Positives = 64/86 (74%)
 Frame = -3

Query: 291  AVQEAVWLRKFLIHLDIIAHTEAAVLLYSDSTAALAFAKDPKYHGKAKHIETHFHYIRDK 112
            A QEAVWL+ FL  L  +A  EA V +Y D+  ++A AK+P++H + KHI+  +H++R+K
Sbjct: 1213 ATQEAVWLKVFLCELGEMASDEA-VKIYEDNQGSIALAKNPEFHKRTKHIDIRYHFVREK 1271

Query: 111  VATREVVLKHISTLNMLADPMTKPIA 34
            V   +VVL+++STL+MLA+ MTKPIA
Sbjct: 1272 VEDGQVVLQYVSTLDMLAEIMTKPIA 1297


>emb|CAN67199.1| hypothetical protein VITISV_017217 [Vitis vinifera]
          Length = 961

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/88 (44%), Positives = 62/88 (70%)
 Frame = -3

Query: 291  AVQEAVWLRKFLIHLDIIAHTEAAVLLYSDSTAALAFAKDPKYHGKAKHIETHFHYIRDK 112
            A +EAVWLR+FL  L+++ +    + LY D++ A+A AK+PK H K KHIE  FH +R+ 
Sbjct: 856  AAKEAVWLREFLKELEVVPNMHELIRLYCDNSGAVANAKEPKNHRKGKHIERKFHLVREI 915

Query: 111  VATREVVLKHISTLNMLADPMTKPIATR 28
            V+  +V++++I++ N +ADP TK + TR
Sbjct: 916  VSRGDVLVENIASANNIADPFTKTLPTR 943


>emb|CAN77149.1| hypothetical protein VITISV_019364 [Vitis vinifera]
          Length = 1544

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/87 (42%), Positives = 59/87 (67%)
 Frame = -3

Query: 291  AVQEAVWLRKFLIHLDIIAHTEAAVLLYSDSTAALAFAKDPKYHGKAKHIETHFHYIRDK 112
            A +E VWLR FL+ L ++   ++ + LY D++ A+A +K+P+ H +AKHIE  +H IRD 
Sbjct: 1439 AAKEVVWLRNFLLDLGVVPSVQSPITLYCDNSGAVANSKEPRSHKRAKHIERKYHLIRDI 1498

Query: 111  VATREVVLKHISTLNMLADPMTKPIAT 31
            V   +VV+  I++ N LADP TK +++
Sbjct: 1499 VQRGDVVVMKIASENNLADPFTKSLSS 1525


>emb|CAN69397.1| hypothetical protein VITISV_021035 [Vitis vinifera]
          Length = 668

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 37/88 (42%), Positives = 59/88 (67%)
 Frame = -3

Query: 291 AVQEAVWLRKFLIHLDIIAHTEAAVLLYSDSTAALAFAKDPKYHGKAKHIETHFHYIRDK 112
           A +EAVWLR+FL  L+++ +    + LY D++ A+A AK+P+ H K KHIE  FH +R+ 
Sbjct: 563 AAKEAVWLREFLKELEVVPNMHEPIRLYCDNSGAVANAKEPRNHRKGKHIERKFHLVREI 622

Query: 111 VATREVVLKHISTLNMLADPMTKPIATR 28
           V+  +V ++ I++ N +ADP TK +  R
Sbjct: 623 VSRGDVSVEKIASANNIADPFTKTLPAR 650


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