BLASTX nr result

ID: Coptis21_contig00033845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033845
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285785.1| PREDICTED: uncharacterized protein LOC100257...   117   1e-24
emb|CAN62585.1| hypothetical protein VITISV_009733 [Vitis vinifera]   117   1e-24
ref|XP_004170941.1| PREDICTED: uncharacterized LOC101212691, par...   110   9e-23
ref|XP_004136286.1| PREDICTED: uncharacterized protein LOC101212...   110   9e-23
ref|XP_002302302.1| predicted protein [Populus trichocarpa] gi|2...   109   2e-22

>ref|XP_002285785.1| PREDICTED: uncharacterized protein LOC100257435 isoform 1 [Vitis
           vinifera] gi|359492865|ref|XP_003634475.1| PREDICTED:
           uncharacterized protein LOC100257435 isoform 2 [Vitis
           vinifera]
          Length = 405

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/67 (80%), Positives = 63/67 (94%)
 Frame = +1

Query: 1   LLMMSAKRRIPLSKIYHCRLLFGIPEDFRDRLYKYPDHFRLVVEEGGKRILELVDWDPTL 180
           LLMMSAK+RIPLSKIYHCR LFGIPEDFRDR+ KYP++F++VVE+ GKR+LELV+WDP L
Sbjct: 175 LLMMSAKKRIPLSKIYHCRALFGIPEDFRDRVSKYPNYFKIVVEDDGKRVLELVNWDPLL 234

Query: 181 AVSALER 201
           AVSALER
Sbjct: 235 AVSALER 241


>emb|CAN62585.1| hypothetical protein VITISV_009733 [Vitis vinifera]
          Length = 405

 Score =  117 bits (293), Expect = 1e-24
 Identities = 54/67 (80%), Positives = 63/67 (94%)
 Frame = +1

Query: 1   LLMMSAKRRIPLSKIYHCRLLFGIPEDFRDRLYKYPDHFRLVVEEGGKRILELVDWDPTL 180
           LLMMSAK+RIPLSKIYHCR LFGIPEDFRDR+ KYP++F++VVE+ GKR+LELV+WDP L
Sbjct: 175 LLMMSAKKRIPLSKIYHCRALFGIPEDFRDRVSKYPNYFKIVVEDDGKRVLELVNWDPLL 234

Query: 181 AVSALER 201
           AVSALER
Sbjct: 235 AVSALER 241


>ref|XP_004170941.1| PREDICTED: uncharacterized LOC101212691, partial [Cucumis sativus]
          Length = 338

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/67 (76%), Positives = 61/67 (91%)
 Frame = +1

Query: 1   LLMMSAKRRIPLSKIYHCRLLFGIPEDFRDRLYKYPDHFRLVVEEGGKRILELVDWDPTL 180
           LLMMSA +RIPL+KIY CR +FGIPEDFRDR+ +YPD+FRLVVE+ GKR+LELV+WDP+L
Sbjct: 119 LLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSL 178

Query: 181 AVSALER 201
           AVS LER
Sbjct: 179 AVSQLER 185


>ref|XP_004136286.1| PREDICTED: uncharacterized protein LOC101212691 [Cucumis sativus]
          Length = 389

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/67 (76%), Positives = 61/67 (91%)
 Frame = +1

Query: 1   LLMMSAKRRIPLSKIYHCRLLFGIPEDFRDRLYKYPDHFRLVVEEGGKRILELVDWDPTL 180
           LLMMSA +RIPL+KIY CR +FGIPEDFRDR+ +YPD+FRLVVE+ GKR+LELV+WDP+L
Sbjct: 170 LLMMSANKRIPLTKIYRCRSVFGIPEDFRDRVSQYPDYFRLVVEDDGKRVLELVNWDPSL 229

Query: 181 AVSALER 201
           AVS LER
Sbjct: 230 AVSQLER 236


>ref|XP_002302302.1| predicted protein [Populus trichocarpa] gi|222844028|gb|EEE81575.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  109 bits (273), Expect = 2e-22
 Identities = 51/67 (76%), Positives = 60/67 (89%)
 Frame = +1

Query: 1   LLMMSAKRRIPLSKIYHCRLLFGIPEDFRDRLYKYPDHFRLVVEEGGKRILELVDWDPTL 180
           LLMMS  +RIPLSKI+HCRLL GIP+DFRDR+ KYPD+FR+VVE  GKRILELV+WDP+L
Sbjct: 177 LLMMSKNKRIPLSKIHHCRLLLGIPDDFRDRVAKYPDYFRIVVEGDGKRILELVNWDPSL 236

Query: 181 AVSALER 201
           AVS LE+
Sbjct: 237 AVSKLEK 243


Top