BLASTX nr result

ID: Coptis21_contig00033836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033836
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285141.1| PREDICTED: uncharacterized protein LOC100257...   131   7e-29
gb|AGE15502.1| GA-stimulated transcript-like protein 6 [Gossypiu...   129   3e-28
ref|XP_003525918.1| PREDICTED: snakin-1 [Glycine max] gi|2556275...   128   6e-28
gb|ABQ42622.1| snakin-1 [Solanum chacoense]                           127   1e-27
gb|ABQ42623.1| snakin-1 [Solanum chacoense] gi|146742174|gb|ABQ4...   127   1e-27

>ref|XP_002285141.1| PREDICTED: uncharacterized protein LOC100257455 [Vitis vinifera]
           gi|302142231|emb|CBI19434.3| unnamed protein product
           [Vitis vinifera]
          Length = 88

 Score =  131 bits (329), Expect = 7e-29
 Identities = 57/80 (71%), Positives = 66/80 (82%)
 Frame = -1

Query: 380 LASLLLISSFLPFANAVSDYPCDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGH 201
           L  L+L SSF+  A A S + CDSKC  RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+
Sbjct: 10  LVFLVLSSSFVQNAMAGSSF-CDSKCAARCSKAGMKDRCLKYCGICCEECKCVPSGTYGN 68

Query: 200 KDECPCYRDKKNSKGNPKCP 141
           K ECPCY+DKKNSKG PKCP
Sbjct: 69  KHECPCYKDKKNSKGQPKCP 88


>gb|AGE15502.1| GA-stimulated transcript-like protein 6 [Gossypium hirsutum]
          Length = 88

 Score =  129 bits (323), Expect = 3e-28
 Identities = 56/80 (70%), Positives = 63/80 (78%)
 Frame = -1

Query: 380 LASLLLISSFLPFANAVSDYPCDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGH 201
           L SL L S F   + A SD+ CDSKC  RC+KAGV DRCLKYCG+CC++C CVPSGT+GH
Sbjct: 10  LVSLALSSCFFEVSIAGSDF-CDSKCAVRCSKAGVQDRCLKYCGICCEKCHCVPSGTFGH 68

Query: 200 KDECPCYRDKKNSKGNPKCP 141
           KDECPCYRD KNSKG  KCP
Sbjct: 69  KDECPCYRDMKNSKGKSKCP 88


>ref|XP_003525918.1| PREDICTED: snakin-1 [Glycine max] gi|255627577|gb|ACU14133.1|
           unknown [Glycine max]
          Length = 88

 Score =  128 bits (321), Expect = 6e-28
 Identities = 55/80 (68%), Positives = 65/80 (81%)
 Frame = -1

Query: 380 LASLLLISSFLPFANAVSDYPCDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGH 201
           L  L+L SSFL  + A S + CDSKC +RCAKAGV DRCL++CG+CC++C CVPSGTYG+
Sbjct: 10  LLCLVLSSSFLEISMAGSPF-CDSKCAQRCAKAGVQDRCLRFCGICCEKCNCVPSGTYGN 68

Query: 200 KDECPCYRDKKNSKGNPKCP 141
           KDECPCYRD KNSKG  KCP
Sbjct: 69  KDECPCYRDMKNSKGKDKCP 88


>gb|ABQ42622.1| snakin-1 [Solanum chacoense]
          Length = 88

 Score =  127 bits (318), Expect = 1e-27
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = -1

Query: 380 LASLLLISSFLPFANAVSDYPCDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGH 201
           L +L++  S +    A S++ CDSKCK RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+
Sbjct: 10  LVTLVITPSLMQTTMAGSNF-CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGN 68

Query: 200 KDECPCYRDKKNSKGNPKCP 141
           K ECPCYRDKKNSKG  KCP
Sbjct: 69  KHECPCYRDKKNSKGKSKCP 88


>gb|ABQ42623.1| snakin-1 [Solanum chacoense] gi|146742174|gb|ABQ42624.1| snakin-1
           [Solanum tuberosum] gi|146742176|gb|ABQ42625.1| snakin-1
           [Solanum commersonii] gi|207091401|gb|ACI23371.1|
           snakin-1 [Solanum tuberosum] gi|207091403|gb|ACI23372.1|
           snakin-1 [Solanum tuberosum] gi|207091405|gb|ACI23373.1|
           snakin-1 [Solanum tuberosum] gi|207091407|gb|ACI23374.1|
           snakin-1 [Solanum tuberosum] gi|220067265|gb|ACL79835.1|
           Snakin-1 [Solanum tuberosum] gi|268373738|gb|ACZ04322.1|
           snakin-1 [Solanum tuberosum]
          Length = 88

 Score =  127 bits (318), Expect = 1e-27
 Identities = 54/80 (67%), Positives = 65/80 (81%)
 Frame = -1

Query: 380 LASLLLISSFLPFANAVSDYPCDSKCKERCAKAGVMDRCLKYCGVCCQECKCVPSGTYGH 201
           L +L++  S +    A S++ CDSKCK RC+KAG+ DRCLKYCG+CC+ECKCVPSGTYG+
Sbjct: 10  LVTLVITPSLIQTTMAGSNF-CDSKCKLRCSKAGLADRCLKYCGICCEECKCVPSGTYGN 68

Query: 200 KDECPCYRDKKNSKGNPKCP 141
           K ECPCYRDKKNSKG  KCP
Sbjct: 69  KHECPCYRDKKNSKGKSKCP 88


Top