BLASTX nr result

ID: Coptis21_contig00033822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033822
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG43553.1|AF211535_1 Avr9/Cf-9 rapidly elicited protein 194 ...    66   3e-09
ref|XP_002299484.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_002509936.1| conserved hypothetical protein [Ricinus comm...    56   3e-06

>gb|AAG43553.1|AF211535_1 Avr9/Cf-9 rapidly elicited protein 194 [Nicotiana tabacum]
          Length = 155

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/54 (62%), Positives = 39/54 (72%)
 Frame = +3

Query: 3   GVYFVYDRSGALSTIPEASEHGMECMGHSTEFDSIVRKTASERFTAASIGISCA 164
           G Y +YD+SGAL+TIPE    G EC   S E  S+VR+T SERFT ASIGISCA
Sbjct: 106 GFYVIYDKSGALTTIPE----GPECDNLSPEIKSLVRRTGSERFTVASIGISCA 155


>ref|XP_002299484.1| predicted protein [Populus trichocarpa] gi|222846742|gb|EEE84289.1|
           predicted protein [Populus trichocarpa]
          Length = 142

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/50 (62%), Positives = 39/50 (78%)
 Frame = +3

Query: 9   YFVYDRSGALSTIPEASEHGMECMGHSTEFDSIVRKTASERFTAASIGIS 158
           Y +YD+SGAL+TIPE  E  ++  G S E +S+VRKT S+RFTAASIGIS
Sbjct: 95  YVIYDKSGALTTIPEVPE--IDFGGFSPEINSLVRKTVSDRFTAASIGIS 142


>ref|XP_002509936.1| conserved hypothetical protein [Ricinus communis]
           gi|223549835|gb|EEF51323.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 182

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 31/51 (60%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
 Frame = +3

Query: 15  VYDRSGALSTIPEASEHGMECMGHSTEFDSIVRKTASERFTAASI-GISCA 164
           VYD+SGALSTIPE  E  ++  G S E +S+VR++ SERFTA S+ GISCA
Sbjct: 134 VYDKSGALSTIPEVPE--IDFGGFSPEINSLVRRSGSERFTATSVMGISCA 182


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