BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033815
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi...   150   8e-35
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]   150   8e-35
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi...   147   9e-34
ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containi...   143   1e-32
ref|XP_003588887.1| Pentatricopeptide repeat-containing protein ...   139   3e-31

>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/95 (72%), Positives = 80/95 (84%)
 Frame = -3

Query: 286 YGSHGQALEALELFHKMEQSRAKPDRVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKP 107
           YGSHGQA EAL+LF KM+QS AKPD+VTFLA++SACSH GLVD+GC+YFN M  +YG KP
Sbjct: 485 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 544

Query: 106 TLEHYSCLVDLLGRAGRLSEAYGILQSNPAIKEDV 2
            +EHYSCL+DLLGR GRL EAY ILQ  P I+EDV
Sbjct: 545 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV 579


>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  150 bits (380), Expect = 8e-35
 Identities = 69/95 (72%), Positives = 80/95 (84%)
 Frame = -3

Query: 286 YGSHGQALEALELFHKMEQSRAKPDRVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKP 107
           YGSHGQA EAL+LF KM+QS AKPD+VTFLA++SACSH GLVD+GC+YFN M  +YG KP
Sbjct: 677 YGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKP 736

Query: 106 TLEHYSCLVDLLGRAGRLSEAYGILQSNPAIKEDV 2
            +EHYSCL+DLLGR GRL EAY ILQ  P I+EDV
Sbjct: 737 AVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDV 771


>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  147 bits (371), Expect = 9e-34
 Identities = 69/95 (72%), Positives = 78/95 (82%)
 Frame = -3

Query: 286 YGSHGQALEALELFHKMEQSRAKPDRVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKP 107
           YGSHGQA  ALELF +M QS  KPDRVTFLA++SAC H GLVD+GC+YFN M N YGI P
Sbjct: 485 YGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYFNQMVNVYGIIP 544

Query: 106 TLEHYSCLVDLLGRAGRLSEAYGILQSNPAIKEDV 2
            +EHYSCL+DLLGRAGRL EAY ILQ NP I++DV
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDV 579


>ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  143 bits (361), Expect = 1e-32
 Identities = 67/95 (70%), Positives = 76/95 (80%)
 Frame = -3

Query: 286 YGSHGQALEALELFHKMEQSRAKPDRVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKP 107
           YGSHG A  ALELF +M QS  KPDRV FLA++SAC H GLVD+GC+YFN M N YGI P
Sbjct: 485 YGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYFNQMINVYGIIP 544

Query: 106 TLEHYSCLVDLLGRAGRLSEAYGILQSNPAIKEDV 2
            +EHYSCL+DLLGRAGRL EAY ILQ NP I++DV
Sbjct: 545 RVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDV 579


>ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477935|gb|AES59138.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 697

 Score =  139 bits (349), Expect = 3e-31
 Identities = 66/94 (70%), Positives = 75/94 (79%)
 Frame = -3

Query: 286 YGSHGQALEALELFHKMEQSRAKPDRVTFLAVMSACSHGGLVDQGCHYFNVMTNKYGIKP 107
           YGSHG+  EALELF +M QS  KPDRVTFLA++SACSH GLVD G ++FN M N YGI P
Sbjct: 485 YGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYHFNQMINVYGIIP 544

Query: 106 TLEHYSCLVDLLGRAGRLSEAYGILQSNPAIKED 5
            +EHYSCL+ LLGRAGRL EAY ILQSNP I +D
Sbjct: 545 RIEHYSCLITLLGRAGRLHEAYEILQSNPEISDD 578