BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis21_contig00033810
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276313.1| PREDICTED: transcription-repair-coupling fac...   213   1e-53
dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]     211   4e-53
ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis th...   208   4e-52
ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis...   208   4e-52
ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putativ...   207   7e-52

>ref|XP_002276313.1| PREDICTED: transcription-repair-coupling factor-like [Vitis
           vinifera]
          Length = 823

 Score =  213 bits (542), Expect = 1e-53
 Identities = 104/129 (80%), Positives = 114/129 (88%)
 Frame = +3

Query: 3   LKGDRSGGNNNTSEGGAFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKDGVKPIEY 182
           LKG+R G      E G FSYKVDPYTL SGDYVVHKKVG+GRFVGIK DV KD   PIEY
Sbjct: 121 LKGERVG-----KENGQFSYKVDPYTLRSGDYVVHKKVGIGRFVGIKLDVPKDSSNPIEY 175

Query: 183 VFIEYADGMAKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMV 362
           VFIEYADGMAKLPVKQA++MLYRYNLP+E+KRPRTLSKLSDTS+WE+RRIKG++AIQKMV
Sbjct: 176 VFIEYADGMAKLPVKQASRMLYRYNLPSESKRPRTLSKLSDTSIWERRRIKGRVAIQKMV 235

Query: 363 VDLMELYLH 389
           VDLMELYLH
Sbjct: 236 VDLMELYLH 244


>dbj|BAJ34179.1| unnamed protein product [Thellungiella halophila]
          Length = 823

 Score =  211 bits (538), Expect = 4e-53
 Identities = 102/129 (79%), Positives = 114/129 (88%)
 Frame = +3

Query: 3   LKGDRSGGNNNTSEGGAFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKDGVKPIEY 182
           LKG R G    T  GG FSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD  +P+EY
Sbjct: 118 LKGVRQG--TETGSGGGFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 175

Query: 183 VFIEYADGMAKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMV 362
           VFIEYADGMAKLP+KQA+++LYRYNLPNE KRPRTLS+LSDTSVWE+R+ KGK+AIQKMV
Sbjct: 176 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 235

Query: 363 VDLMELYLH 389
           VDLMELYLH
Sbjct: 236 VDLMELYLH 244


>ref|NP_566160.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|332640233|gb|AEE73754.1| putative DEAD/DEAH box
           helicase [Arabidopsis thaliana]
          Length = 823

 Score =  208 bits (529), Expect = 4e-52
 Identities = 101/129 (78%), Positives = 114/129 (88%)
 Frame = +3

Query: 3   LKGDRSGGNNNTSEGGAFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKDGVKPIEY 182
           LKG R G     +  GAFSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD  +P+EY
Sbjct: 118 LKGIRQG--TKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 175

Query: 183 VFIEYADGMAKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMV 362
           VFIEYADGMAKLP+KQA+++LYRYNLPNE KRPRTLS+LSDTSVWE+R+ KGK+AIQKMV
Sbjct: 176 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 235

Query: 363 VDLMELYLH 389
           VDLMELYLH
Sbjct: 236 VDLMELYLH 244


>ref|NP_001078092.1| putative DEAD/DEAH box helicase [Arabidopsis thaliana]
           gi|6513947|gb|AAF14851.1|AC011664_33 putative helicase
           [Arabidopsis thaliana] gi|332640234|gb|AEE73755.1|
           putative DEAD/DEAH box helicase [Arabidopsis thaliana]
          Length = 822

 Score =  208 bits (529), Expect = 4e-52
 Identities = 101/129 (78%), Positives = 114/129 (88%)
 Frame = +3

Query: 3   LKGDRSGGNNNTSEGGAFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKDGVKPIEY 182
           LKG R G     +  GAFSYKVDPY+L SGDYVVHKKVG+GRFVGIKFDV KD  +P+EY
Sbjct: 117 LKGIRQG--TKAAGDGAFSYKVDPYSLLSGDYVVHKKVGIGRFVGIKFDVPKDSSEPLEY 174

Query: 183 VFIEYADGMAKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMV 362
           VFIEYADGMAKLP+KQA+++LYRYNLPNE KRPRTLS+LSDTSVWE+R+ KGK+AIQKMV
Sbjct: 175 VFIEYADGMAKLPLKQASRLLYRYNLPNETKRPRTLSRLSDTSVWERRKTKGKVAIQKMV 234

Query: 363 VDLMELYLH 389
           VDLMELYLH
Sbjct: 235 VDLMELYLH 243


>ref|XP_002512803.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223547814|gb|EEF49306.1| dead box ATP-dependent RNA
           helicase, putative [Ricinus communis]
          Length = 857

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/129 (79%), Positives = 112/129 (86%)
 Frame = +3

Query: 3   LKGDRSGGNNNTSEGGAFSYKVDPYTLHSGDYVVHKKVGVGRFVGIKFDVSKDGVKPIEY 182
           LKG++ G        G FSY+VDPY L+SGDYVVHKKVGVGRFVGIKFDVSK   +PIEY
Sbjct: 123 LKGEKQGKGK-----GGFSYRVDPYLLNSGDYVVHKKVGVGRFVGIKFDVSKSSTEPIEY 177

Query: 183 VFIEYADGMAKLPVKQAAKMLYRYNLPNEAKRPRTLSKLSDTSVWEKRRIKGKIAIQKMV 362
           VFIEYADGMAKLPVKQA+KMLYRY+LPNE KRPRTL+KL+DTS WEKR+ KGKIAIQKMV
Sbjct: 178 VFIEYADGMAKLPVKQASKMLYRYSLPNEKKRPRTLNKLNDTSTWEKRKTKGKIAIQKMV 237

Query: 363 VDLMELYLH 389
           VDLMELYLH
Sbjct: 238 VDLMELYLH 246